RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 LETM1O95202 739 aaPredicted RBP23.75■■□□□ 1.39
SYNC-201ENST00000373484 GCLCP48506 637 aaPredicted RBP23.75■■□□□ 1.39
SYNC-201ENST00000373484 ANTXR2P58335 489 aa23.75■■□□□ 1.39
SYNC-201ENST00000373484 FAM83BQ5T0W9 1011 aa23.75■■□□□ 1.39
SYNC-201ENST00000373484 NUP88Q99567 741 aaPredicted RBP23.75■■□□□ 1.39
SYNC-201ENST00000373484 PRDM10Q9NQV6 1147 aa23.75■■□□□ 1.39
SYNC-201ENST00000373484 RBM27Q9P2N5 1060 aaKnown RBP23.75■■□□□ 1.39
SYNC-201ENST00000373484 ZSWIM8A7E2V4 1837 aa23.75■■□□□ 1.39
SYNC-201ENST00000373484 KRT32Q14532 448 aa23.75■■□□□ 1.39
SYNC-201ENST00000373484 SEC23AQ15436 765 aa23.75■■□□□ 1.39
SYNC-201ENST00000373484 GMCL1Q96IK5 515 aa23.75■■□□□ 1.39
SYNC-201ENST00000373484 FKTNO75072 461 aa23.74■■□□□ 1.39
SYNC-201ENST00000373484 SP3Q02447 781 aa23.74■■□□□ 1.39
SYNC-201ENST00000373484 COL9A3Q14050 684 aaPredicted RBP23.74■■□□□ 1.39
SYNC-201ENST00000373484 COG2Q14746 738 aa23.74■■□□□ 1.39
SYNC-201ENST00000373484 CHST3Q7LGC8 479 aa23.74■■□□□ 1.39
SYNC-201ENST00000373484 SNX14Q9Y5W7 946 aa23.74■■□□□ 1.39
SYNC-201ENST00000373484 DYNC1I1O14576 645 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 ADCK5Q3MIX3 580 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 LBX2Q6XYB7 198 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 GTF3C2Q8WUA4 911 aaPredicted RBP23.73■■□□□ 1.39
SYNC-201ENST00000373484 NEK1Q96PY6 1258 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 MYPNQ86TC9 1320 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 SPDYE16A6NNV3 312 aaPredicted RBP23.73■■□□□ 1.39
SYNC-201ENST00000373484 FLOT1O75955 427 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 POTEEQ6S8J3 1075 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 ANKRD13CQ8N6S4 541 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 MTA3Q9BTC8 594 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 HOXC10Q9NYD6 342 aa23.73■■□□□ 1.39
SYNC-201ENST00000373484 IFIT3O14879 490 aaKnown RBP23.72■■□□□ 1.39
SYNC-201ENST00000373484 BMP3P12645 472 aa23.72■■□□□ 1.39
SYNC-201ENST00000373484 SART3Q15020 963 aaKnown RBP23.72■■□□□ 1.39
SYNC-201ENST00000373484 FAM110CQ1W6H9 321 aa23.72■■□□□ 1.39
SYNC-201ENST00000373484 IFIT1BQ5T764 474 aaKnown RBP23.72■■□□□ 1.39
SYNC-201ENST00000373484 RASGRP2Q7LDG7 609 aa23.72■■□□□ 1.39
SYNC-201ENST00000373484 PNMA1Q8ND90 353 aa23.72■■□□□ 1.39
SYNC-201ENST00000373484 FBXO28Q9NVF7 368 aa23.72■■□□□ 1.39
SYNC-201ENST00000373484 ERICH2A1L162 156 aa23.71■■□□□ 1.39
SYNC-201ENST00000373484 PRC1O43663 620 aa23.71■■□□□ 1.39
SYNC-201ENST00000373484 DSG3P32926 999 aa23.71■■□□□ 1.39
SYNC-201ENST00000373484 SLC1A4P43007 532 aa23.71■■□□□ 1.39
SYNC-201ENST00000373484 IGDCC4Q8TDY8 1250 aa23.71■■□□□ 1.39
SYNC-201ENST00000373484 DCAF4Q8WV16 495 aa23.71■■□□□ 1.39
SYNC-201ENST00000373484 KAT14Q9H8E8 782 aa23.71■■□□□ 1.39
SYNC-201ENST00000373484 MORF4L1Q9UBU8 362 aa23.71■■□□□ 1.39
SYNC-201ENST00000373484 RBPJLQ9UBG7 517 aa23.7■■□□□ 1.39
SYNC-201ENST00000373484 MTMR7Q9Y216 660 aa23.7■■□□□ 1.39
SYNC-201ENST00000373484 SNHG28P0DPA3 235 aa23.7■■□□□ 1.38
SYNC-201ENST00000373484 PDHBP11177 359 aa23.7■■□□□ 1.38
SYNC-201ENST00000373484 WTAPQ15007 396 aa23.7■■□□□ 1.38
SYNC-201ENST00000373484 TMEM87BQ96K49 555 aa23.7■■□□□ 1.38
SYNC-201ENST00000373484 TXNRD2Q9NNW7 524 aa23.7■■□□□ 1.38
SYNC-201ENST00000373484 PPP1R9AQ9ULJ8 1098 aa23.7■■□□□ 1.38
SYNC-201ENST00000373484 WDR19Q8NEZ3 1342 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 LACTBP83111 547 aaPredicted RBP23.69■■□□□ 1.38
SYNC-201ENST00000373484 TMEM67Q5HYA8 995 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 SASS6Q6UVJ0 657 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 CHMP4CQ96CF2 233 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 ERO1AQ96HE7 468 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 SLF1Q9BQI6 1058 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 FEM1BQ9UK73 627 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 ADAMTS5Q9UNA0 930 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 RABGAP1Q9Y3P9 1069 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 DOCK3Q8IZD9 2030 aa23.69■■□□□ 1.38
SYNC-201ENST00000373484 HMGB1P09429 215 aaKnown RBP23.68■■□□□ 1.38
SYNC-201ENST00000373484 KCTD1Q719H9 257 aa23.68■■□□□ 1.38
SYNC-201ENST00000373484 CD99L2Q8TCZ2 262 aa23.68■■□□□ 1.38
SYNC-201ENST00000373484 ATG4CQ96DT6 458 aa23.68■■□□□ 1.38
SYNC-201ENST00000373484 PAGR1Q9BTK6 254 aa23.68■■□□□ 1.38
SYNC-201ENST00000373484 SENP2Q9HC62 589 aa23.68■■□□□ 1.38
SYNC-201ENST00000373484 TMEM232C9JQI7 657 aa23.68■■□□□ 1.38
SYNC-201ENST00000373484 PEX10O60683 326 aa23.68■■□□□ 1.38
SYNC-201ENST00000373484 CNMDO75829 334 aa23.68■■□□□ 1.38
SYNC-201ENST00000373484 PDIA4P13667 645 aaKnown RBP23.68■■□□□ 1.38
SYNC-201ENST00000373484 EXOSC10Q01780 885 aaKnown RBP23.68■■□□□ 1.38
SYNC-201ENST00000373484 DHX32Q7L7V1 743 aaKnown RBP23.68■■□□□ 1.38
SYNC-201ENST00000373484 PRPF38AQ8NAV1 312 aaKnown RBP23.68■■□□□ 1.38
SYNC-201ENST00000373484 JAKMIP1Q96N16 626 aaKnown RBP23.68■■□□□ 1.38
SYNC-201ENST00000373484 LY9Q9HBG7 655 aa23.68■■□□□ 1.38
SYNC-201ENST00000373484 PLA2G6O60733 806 aa23.67■■□□□ 1.38
SYNC-201ENST00000373484 STAT2P52630 851 aa23.67■■□□□ 1.38
SYNC-201ENST00000373484 ERVK-9P63128 1117 aa23.67■■□□□ 1.38
SYNC-201ENST00000373484 ERVK-24P63145 666 aa23.67■■□□□ 1.38
SYNC-201ENST00000373484 CAP1Q01518 475 aa23.67■■□□□ 1.38
SYNC-201ENST00000373484 CCDC96Q2M329 555 aa23.67■■□□□ 1.38
SYNC-201ENST00000373484 MB21D1Q8N884 522 aa23.67■■□□□ 1.38
SYNC-201ENST00000373484 GPRC5AQ8NFJ5 357 aa23.67■■□□□ 1.38
SYNC-201ENST00000373484 BTBD7Q9P203 1132 aa23.67■■□□□ 1.38
SYNC-201ENST00000373484 R3HCC1Q9Y3T6 440 aaKnown RBP23.67■■□□□ 1.38
SYNC-201ENST00000373484 SH2B2O14492 632 aaPredicted RBP23.66■■□□□ 1.38
SYNC-201ENST00000373484 ZNF543Q08ER8 600 aa23.66■■□□□ 1.38
SYNC-201ENST00000373484 SAMD1Q6SPF0 538 aaPredicted RBP23.66■■□□□ 1.38
SYNC-201ENST00000373484 FAM160B2Q86V87 743 aa23.66■■□□□ 1.38
SYNC-201ENST00000373484 CHURC1Q8WUH1 139 aa23.66■■□□□ 1.38
SYNC-201ENST00000373484 GPHNQ9NQX3 736 aaPredicted RBP23.66■■□□□ 1.38
SYNC-201ENST00000373484 ATP6V1DQ9Y5K8 247 aa23.66■■□□□ 1.38
SYNC-201ENST00000373484 LIFRP42702 1097 aa23.66■■□□□ 1.38
SYNC-201ENST00000373484 KIF22Q14807 665 aa23.66■■□□□ 1.38
SYNC-201ENST00000373484 Q3C1V9 767 aa23.66■■□□□ 1.38
SYNC-201ENST00000373484 LRRC2Q9BYS8 371 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms