RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 SLC38A10Q9HBR0 1119 aa25.03■■□□□ 1.6
TMEM54-202ENST00000373463 RIPK3Q9Y572 518 aa25.03■■□□□ 1.6
TMEM54-202ENST00000373463 ATP2A1O14983 1001 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 IGHA2P01877 340 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 HMGCRP04035 888 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 HOXC6P09630 235 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 RGS2P41220 211 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 NT5C2P49902 561 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 STAT2P52630 851 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 TTBK2Q6IQ55 1244 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 ENAHQ8N8S7 591 aaPredicted RBP25.02■■□□□ 1.6
TMEM54-202ENST00000373463 DCAF4Q8WV16 495 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 SHISA4Q96DD7 197 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 ZSCAN10Q96SZ4 725 aaPredicted RBP25.02■■□□□ 1.6
TMEM54-202ENST00000373463 KRT23Q9C075 422 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 CNNM2Q9H8M5 875 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 FLRT1Q9NZU1 646 aa25.02■■□□□ 1.6
TMEM54-202ENST00000373463 E7EWF7 191 aa25.01■■□□□ 1.59
TMEM54-202ENST00000373463 PLA2G6O60733 806 aa25.01■■□□□ 1.59
TMEM54-202ENST00000373463 SNHG28P0DPA3 235 aa25.01■■□□□ 1.59
TMEM54-202ENST00000373463 PDHBP11177 359 aa25.01■■□□□ 1.59
TMEM54-202ENST00000373463 ADORA2AP29274 412 aa25.01■■□□□ 1.59
TMEM54-202ENST00000373463 UBXN2AP68543 259 aa25.01■■□□□ 1.59
TMEM54-202ENST00000373463 COL9A3Q14050 684 aaPredicted RBP25.01■■□□□ 1.59
TMEM54-202ENST00000373463 DGKHQ86XP1 1220 aa25.01■■□□□ 1.59
TMEM54-202ENST00000373463 CWC22Q9HCG8 908 aaKnown RBP25.01■■□□□ 1.59
TMEM54-202ENST00000373463 RAVER2Q9HCJ3 691 aaKnown RBP25.01■■□□□ 1.59
TMEM54-202ENST00000373463 IVNS1ABPQ9Y6Y0 642 aa25.01■■□□□ 1.59
TMEM54-202ENST00000373463 COBLO75128 1261 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 CDC45O75419 566 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 SLC25A27O95847 323 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 MAP3K21Q5TCX8 1036 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 FAM160B2Q86V87 743 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 IQCA1Q86XH1 822 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 TMEM106CQ9BVX2 250 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 TEX13BQ9BXU2 312 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 PRR12Q9ULL5 1215 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 ZNF536O15090 1300 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 TNKSO95271 1327 aa25■■□□□ 1.59
TMEM54-202ENST00000373463 TNRC18O15417 2968 aaPredicted RBP24.99■■□□□ 1.59
TMEM54-202ENST00000373463 SMCHD1A6NHR9 2005 aa24.99■■□□□ 1.59
TMEM54-202ENST00000373463 STRNO43815 780 aa24.99■■□□□ 1.59
TMEM54-202ENST00000373463 SNAP25P60880 206 aa24.99■■□□□ 1.59
TMEM54-202ENST00000373463 SEC23AQ15436 765 aa24.99■■□□□ 1.59
TMEM54-202ENST00000373463 CCDC96Q2M329 555 aa24.99■■□□□ 1.59
TMEM54-202ENST00000373463 FRMPD2Q68DX3 1309 aaPredicted RBP24.99■■□□□ 1.59
TMEM54-202ENST00000373463 SNRNP48Q6IEG0 339 aaKnown RBP24.99■■□□□ 1.59
TMEM54-202ENST00000373463 BTNL9Q6UXG8 535 aa24.99■■□□□ 1.59
TMEM54-202ENST00000373463 CPXCR1Q8N123 301 aa24.99■■□□□ 1.59
TMEM54-202ENST00000373463 CHURC1Q8WUH1 139 aa24.99■■□□□ 1.59
TMEM54-202ENST00000373463 RNF208Q9H0X6 261 aa24.99■■□□□ 1.59
TMEM54-202ENST00000373463 ISY1Q9ULR0 285 aaKnown RBP24.99■■□□□ 1.59
TMEM54-202ENST00000373463 ZBED4O75132 1171 aa24.98■■□□□ 1.59
TMEM54-202ENST00000373463 GJB1P08034 283 aa24.98■■□□□ 1.59
TMEM54-202ENST00000373463 SLC16A2P36021 539 aa24.98■■□□□ 1.59
TMEM54-202ENST00000373463 NECTIN1Q15223 517 aa24.98■■□□□ 1.59
TMEM54-202ENST00000373463 ABRAQ8N0Z2 381 aa24.98■■□□□ 1.59
TMEM54-202ENST00000373463 GPCPD1Q9NPB8 672 aa24.98■■□□□ 1.59
TMEM54-202ENST00000373463 PAK6Q9NQU5 681 aaPredicted RBP24.98■■□□□ 1.59
TMEM54-202ENST00000373463 PLXNA1Q9UIW2 1896 aa24.98■■□□□ 1.59
TMEM54-202ENST00000373463 ZKSCAN1P17029 563 aaPredicted RBP24.97■■□□□ 1.59
TMEM54-202ENST00000373463 ANTXR2P58335 489 aa24.97■■□□□ 1.59
TMEM54-202ENST00000373463 MLLT1Q03111 559 aaPredicted RBP24.97■■□□□ 1.59
TMEM54-202ENST00000373463 ZNF543Q08ER8 600 aa24.97■■□□□ 1.59
TMEM54-202ENST00000373463 KIAA1211Q6ZU35 1233 aa24.97■■□□□ 1.59
TMEM54-202ENST00000373463 PNMA1Q8ND90 353 aa24.97■■□□□ 1.59
TMEM54-202ENST00000373463 ANO2Q9NQ90 1003 aa24.97■■□□□ 1.59
TMEM54-202ENST00000373463 SLC27A2O14975 620 aa24.96■■□□□ 1.59
TMEM54-202ENST00000373463 OAZ1P54368 228 aa24.96■■□□□ 1.59
TMEM54-202ENST00000373463 CACNB2Q08289 660 aaPredicted RBP24.96■■□□□ 1.59
TMEM54-202ENST00000373463 IKQ13123 557 aaPredicted RBP24.96■■□□□ 1.59
TMEM54-202ENST00000373463 CCDC178Q5BJE1 867 aa24.96■■□□□ 1.59
TMEM54-202ENST00000373463 MB21D2Q8IYB1 491 aaPredicted RBP24.96■■□□□ 1.59
TMEM54-202ENST00000373463 SENP2Q9HC62 589 aa24.96■■□□□ 1.59
TMEM54-202ENST00000373463 FCER1AP12319 257 aa24.95■■□□□ 1.58
TMEM54-202ENST00000373463 PRKAR2AP13861 404 aaKnown RBP24.95■■□□□ 1.58
TMEM54-202ENST00000373463 TAL1P17542 331 aaPredicted RBP24.95■■□□□ 1.58
TMEM54-202ENST00000373463 GJA8P48165 433 aa24.95■■□□□ 1.58
TMEM54-202ENST00000373463 CREB3L3Q68CJ9 461 aa24.95■■□□□ 1.58
TMEM54-202ENST00000373463 TRMT44Q8IYL2 757 aaKnown RBP24.95■■□□□ 1.58
TMEM54-202ENST00000373463 U2AF1L4Q8WU68 220 aaKnown RBP24.95■■□□□ 1.58
TMEM54-202ENST00000373463 AGBL1Q96MI9 1066 aa24.95■■□□□ 1.58
TMEM54-202ENST00000373463 MMP19Q99542 508 aa24.95■■□□□ 1.58
TMEM54-202ENST00000373463 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.95■■□□□ 1.58
TMEM54-202ENST00000373463 RPTORQ8N122 1335 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 PGK2P07205 417 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 FDX1P10109 184 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 COPB2P35606 906 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.94■■□□□ 1.58
TMEM54-202ENST00000373463 CHST3Q7LGC8 479 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 DPP9Q86TI2 863 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 NCOA7Q8NI08 942 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 DEFB118Q96PH6 123 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 UBAC1Q9BSL1 405 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 RANBP17Q9H2T7 1088 aaKnown RBP24.94■■□□□ 1.58
TMEM54-202ENST00000373463 CPVLQ9H3G5 476 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 KAT14Q9H8E8 782 aa24.94■■□□□ 1.58
TMEM54-202ENST00000373463 MKI67P46013 3256 aaKnown RBP24.93■■□□□ 1.58
TMEM54-202ENST00000373463 GOLGA8HP0CJ92 632 aa24.93■■□□□ 1.58
TMEM54-202ENST00000373463 CYP2C19P33261 490 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms