RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 CTTNBP2NLQ9P2B4 639 aa12.07□□□□□ -0.48
CSMD2-204ENST00000373380 GCNT3O95395 438 aa12.07□□□□□ -0.48
CSMD2-204ENST00000373380 CFBP00751 764 aa12.07□□□□□ -0.48
CSMD2-204ENST00000373380 WHAMMP3Q1A5X7 153 aa12.07□□□□□ -0.48
CSMD2-204ENST00000373380 PEX26Q7Z412 305 aa12.07□□□□□ -0.48
CSMD2-204ENST00000373380 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
CSMD2-204ENST00000373380 TMEM87AQ8NBN3 555 aa12.07□□□□□ -0.48
CSMD2-204ENST00000373380 CCDC160A6NGH7 325 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 SNAP23O00161 211 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 IKBKBO14920 756 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 EXOC3O60645 756 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 TOM1O60784 492 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 PPP6R2O75170 966 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 MAP2K2P36507 400 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 COPB1P53618 953 aaKnown RBP12.06□□□□□ -0.48
CSMD2-204ENST00000373380 PAK2Q13177 524 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 ARHGAP44Q17R89 818 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 MFSD14BQ5SR56 506 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 MYCT1Q8N699 235 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 PDE11AQ9HCR9 933 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 ARPP21Q9UBL0 812 aaPredicted RBP12.06□□□□□ -0.48
CSMD2-204ENST00000373380 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
CSMD2-204ENST00000373380 ADD2P35612 726 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 PPFIA1Q13136 1202 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 NAA30Q147X3 362 aaPredicted RBP12.06□□□□□ -0.48
CSMD2-204ENST00000373380 RSRC1Q96IZ7 334 aaKnown RBP12.06□□□□□ -0.48
CSMD2-204ENST00000373380 PDLIM2Q96JY6 352 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 ARHGEF35A5YM69 484 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 ZMYND10O75800 440 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 CIAO1O76071 339 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 CDC25BP30305 580 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 GTF2IP78347 998 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 MXRA7P84157 204 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 B4GALNT4Q76KP1 1039 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 CPXCR1Q8N123 301 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 LRRC45Q96CN5 670 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 NAP1L4Q99733 375 aaKnown RBP12.06□□□□□ -0.48
CSMD2-204ENST00000373380 MRPL44Q9H9J2 332 aaKnown RBP12.06□□□□□ -0.48
CSMD2-204ENST00000373380 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
CSMD2-204ENST00000373380 CDC23Q9UJX2 597 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 CEP83Q9Y592 693 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 ERBB3P21860 1342 aa12.06□□□□□ -0.48
CSMD2-204ENST00000373380 PTPRUQ92729 1446 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 ACTN4O43707 911 aaKnown RBP12.05□□□□□ -0.48
CSMD2-204ENST00000373380 FLOT1O75955 427 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 DYNLL1P63167 89 aaKnown RBP12.05□□□□□ -0.48
CSMD2-204ENST00000373380 CEP63Q96MT8 703 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 TTC14Q96N46 770 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 GSDMAQ96QA5 445 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 LZTS2Q9BRK4 669 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 FRMPD2Q68DX3 1309 aaPredicted RBP12.05□□□□□ -0.48
CSMD2-204ENST00000373380 CYP2D7A0A087X1C5 515 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 ABCB4P21439 1286 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 RBL2Q08999 1139 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 KRT71Q3SY84 523 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 TRIM58Q8NG06 486 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 PPM1EQ8WY54 764 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 RBM17Q96I25 401 aaKnown RBP12.05□□□□□ -0.48
CSMD2-204ENST00000373380 CABS1Q96KC9 395 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 UTP11Q9Y3A2 253 aaKnown RBP12.05□□□□□ -0.48
CSMD2-204ENST00000373380 PCDHB6Q9Y5E3 794 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 OR52Z1P0C646 297 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 ATP1A2P50993 1020 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 CLNS1AP54105 237 aaKnown RBP12.05□□□□□ -0.48
CSMD2-204ENST00000373380 MYOCDQ8IZQ8 938 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
CSMD2-204ENST00000373380 RABGGTAQ92696 567 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 DDX12PQ92771 950 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 FOXP1Q9H334 677 aaPredicted RBP12.05□□□□□ -0.48
CSMD2-204ENST00000373380 PCDHA12Q9UN75 941 aa12.05□□□□□ -0.48
CSMD2-204ENST00000373380 ERCC5P28715 1186 aaPredicted RBP12.04□□□□□ -0.48
CSMD2-204ENST00000373380 C6orf163Q5TEZ5 329 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 EPSTI1Q96J88 318 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 NAP1L3Q99457 506 aaPredicted RBP12.04□□□□□ -0.48
CSMD2-204ENST00000373380 LSM14BQ9BX40 385 aaKnown RBP12.04□□□□□ -0.48
CSMD2-204ENST00000373380 MAN1B1Q9UKM7 699 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 CALUO43852 315 aaPredicted RBP12.04□□□□□ -0.48
CSMD2-204ENST00000373380 IFNAR1P17181 557 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 NEK8Q86SG6 692 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 LCORLQ8N3X6 602 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 FNBP1Q96RU3 617 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 RNF26Q9BY78 433 aaPredicted RBP12.04□□□□□ -0.48
CSMD2-204ENST00000373380 SPTLC3Q9NUV7 552 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 TUBGCP2Q9BSJ2 902 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 B4DLN1 442 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 KCNK3O14649 394 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 FMNL1O95466 1100 aaPredicted RBP12.04□□□□□ -0.48
CSMD2-204ENST00000373380 SRGAP1Q7Z6B7 1085 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 GPBP1Q86WP2 473 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 TPH2Q8IWU9 490 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 CCDC63Q8NA47 563 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 ACRBPQ8NEB7 543 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 RPGRIP1Q96KN7 1286 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 DNAI2Q9GZS0 605 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 PPANQ9NQ55 473 aaKnown RBP12.04□□□□□ -0.48
CSMD2-204ENST00000373380 ASIC3Q9UHC3 531 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms