RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 SF3B2Q13435 895 aaKnown RBP14.87□□□□□ -0.03
NCDN-203ENST00000373253 PRKG1Q13976 671 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 USP17L6PQ6QN14 398 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 CCDC84Q86UT8 332 aaPredicted RBP14.87□□□□□ -0.03
NCDN-203ENST00000373253 CARD6Q9BX69 1037 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 LRWD1Q9UFC0 647 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 TCEAL9Q9UHQ7 104 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 SERPINB13Q9UIV8 391 aa14.87□□□□□ -0.03
NCDN-203ENST00000373253 A0A087X0B3 334 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 POTEMA6NI47 508 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 TBC1D10BQ4KMP7 808 aaPredicted RBP14.86□□□□□ -0.03
NCDN-203ENST00000373253 CAGE1Q8TC20 777 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 PSMB7Q99436 277 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 SLF1Q9BQI6 1058 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 KANSL2Q9H9L4 492 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.86□□□□□ -0.036e-7■■■■■ 121.8
NCDN-203ENST00000373253 HOMER2Q9NSB8 354 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 PHRF1Q9P1Y6 1649 aaKnown RBP14.86□□□□□ -0.03
NCDN-203ENST00000373253 FAM205AQ6ZU69 1335 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 ZSCAN12O43309 604 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 SNX29Q8TEQ0 813 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 FERMT2Q96AC1 680 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 PSMA7O14818 248 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 POLR3GO15318 223 aaPredicted RBP14.86□□□□□ -0.03
NCDN-203ENST00000373253 BBOX1O75936 387 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 SLFN14P0C7P3 912 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 CASP14P31944 242 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 MATR3P43243 847 aaKnown RBP eCLIP14.86□□□□□ -0.03
NCDN-203ENST00000373253 CYP4A11Q02928 519 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 PAK1Q13153 545 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 ZNF569Q5MCW4 686 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 SPECC1LQ69YQ0 1117 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 TYW1BQ6NUM6 668 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 CCDC174Q6PII3 467 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 CPXCR1Q8N123 301 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 CSGALNACT2Q8N6G5 542 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 PCDHA4Q9UN74 947 aa14.86□□□□□ -0.03
NCDN-203ENST00000373253 SOWAHDA6NJG2 315 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 BMP15O95972 392 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 RASA1P20936 1047 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 KRT9P35527 623 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 SP4Q02446 784 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 DDR1Q08345 913 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 PFKFB3Q16875 520 aaPredicted RBP14.85□□□□□ -0.03
NCDN-203ENST00000373253 CCDC43Q96MW1 224 aaKnown RBP14.85□□□□□ -0.03
NCDN-203ENST00000373253 DAGLAQ9Y4D2 1042 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 CNTNAP4Q9C0A0 1308 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 DDX39AO00148 427 aaKnown RBP14.85□□□□□ -0.03
NCDN-203ENST00000373253 AOC3Q16853 763 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 SHROOM1Q2M3G4 852 aaPredicted RBP14.85□□□□□ -0.03
NCDN-203ENST00000373253 TDRD12Q587J7 1177 aaKnown RBP14.85□□□□□ -0.03
NCDN-203ENST00000373253 WDR19Q8NEZ3 1342 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 CFBP00751 764 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 CALCRLQ16602 461 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 PTPROQ16827 1216 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 CAPZA3Q96KX2 299 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 CRACR2AQ9BSW2 395 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 PHF20Q9BVI0 1012 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 PLEKHA4Q9H4M7 779 aa14.85□□□□□ -0.03
NCDN-203ENST00000373253 ZNHIT6Q9NWK9 470 aaKnown RBP14.85□□□□□ -0.03
NCDN-203ENST00000373253 FLT1P17948 1338 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 CNTNAP5Q8WYK1 1306 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 AKR1B15C9JRZ8 316 aaPredicted RBP14.84□□□□□ -0.03
NCDN-203ENST00000373253 SLC30A10Q6XR72 485 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 RPN1P04843 607 aaKnown RBP14.84□□□□□ -0.03
NCDN-203ENST00000373253 HOXA13P31271 388 aaPredicted RBP14.84□□□□□ -0.03
NCDN-203ENST00000373253 EN1Q05925 392 aaPredicted RBP14.84□□□□□ -0.03
NCDN-203ENST00000373253 KRT79Q5XKE5 535 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 LARGE2Q8N3Y3 721 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 OGFOD1Q8N543 542 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 PPP1R13BQ96KQ4 1090 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 MEIS1O00470 390 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 SORBS3O60504 671 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 TDP2O95551 362 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 BMP6P22004 513 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 ADCY7P51828 1080 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 PPARDQ03181 441 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 RBL2Q08999 1139 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 PPP2R5BQ15173 497 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 CCDC40Q4G0X9 1142 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 FAM207AQ9NSI2 230 aaPredicted RBP14.84□□□□□ -0.03
NCDN-203ENST00000373253 CGNQ9P2M7 1197 aaKnown RBP14.84□□□□□ -0.03
NCDN-203ENST00000373253 PAXBP1Q9Y5B6 917 aa14.84□□□□□ -0.03
NCDN-203ENST00000373253 ERICH4A6NGS2 130 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 USP17L10C9JJH3 530 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 MYO1BO43795 1136 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 PLCG1P19174 1290 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 CACNA2D4Q7Z3S7 1137 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 NLGN1Q8N2Q7 840 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 PLCD3Q8N3E9 789 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 TBC1D22AQ8WUA7 517 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
NCDN-203ENST00000373253 KIF5CO60282 957 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 TBC1D8BQ0IIM8 1120 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 CERKLQ49MI3 558 aaPredicted RBP14.83□□□□□ -0.04
NCDN-203ENST00000373253 SLC10A5Q5PT55 438 aa14.83□□□□□ -0.04
NCDN-203ENST00000373253 RC3H1Q5TC82 1133 aaKnown RBP14.83□□□□□ -0.04
NCDN-203ENST00000373253 RBM43Q6ZSC3 357 aaKnown RBP14.83□□□□□ -0.04
NCDN-203ENST00000373253 SMAP1Q8IYB5 467 aaPredicted RBP14.83□□□□□ -0.04
NCDN-203ENST00000373253 SAMM50Q9Y512 469 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms