RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ATP8B1O43520 1251 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 COPB1P53618 953 aaKnown RBP13.51□□□□□ -0.25
NCDN-202ENST00000373243 INF2Q27J81 1249 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 CCDC40Q4G0X9 1142 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
NCDN-202ENST00000373243 TUBE1Q9UJT0 475 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 ELF1P32519 619 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 LIFRP42702 1097 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 SPTY2D1Q68D10 685 aaPredicted RBP13.51□□□□□ -0.25
NCDN-202ENST00000373243 IQCEQ6IPM2 695 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 TRMT1LQ7Z2T5 733 aaKnown RBP13.51□□□□□ -0.25
NCDN-202ENST00000373243 C1orf167Q5SNV9 1468 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 CHRNDQ07001 517 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 LRRC31Q6UY01 552 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 RAD9BQ6WBX8 426 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 OR8K1Q8NGG5 319 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 TRIM6Q9C030 488 aaPredicted RBP13.51□□□□□ -0.25
NCDN-202ENST00000373243 SEPT11Q9NVA2 429 aaKnown RBP13.51□□□□□ -0.25
NCDN-202ENST00000373243 HDAC6Q9UBN7 1215 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 ODF2LQ9ULJ1 636 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 RIPOR2Q9Y4F9 1068 aa13.51□□□□□ -0.25
NCDN-202ENST00000373243 GSG1L2A8MUP6 293 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 CAND2O75155 1236 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 KIAA0754O94854 1291 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 CASP7P55210 303 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
NCDN-202ENST00000373243 BRD3Q15059 726 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 PTPAQ15257 358 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 KRT31Q15323 416 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 FERMT2Q96AC1 680 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 ISCA1Q9BUE6 129 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 FUT8Q9BYC5 575 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 PSD3Q9NYI0 1048 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 ZNF652Q9Y2D9 606 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 ADGRG1Q9Y653 693 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 ERCC5P28715 1186 aaPredicted RBP13.5□□□□□ -0.25
NCDN-202ENST00000373243 TXKP42681 527 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 KRT83P78385 493 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 TFAP4Q01664 338 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 CUL4BQ13620 913 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 FCHSD1Q86WN1 690 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 FMNL3Q8IVF7 1028 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 GSPT2Q8IYD1 628 aaKnown RBP13.5□□□□□ -0.25
NCDN-202ENST00000373243 KAT2BQ92831 832 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 CALML4Q96GE6 196 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 AGXT2Q9BYV1 514 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 CPVLQ9H3G5 476 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 A0A0U1RQJ8 604 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 KDM4FA0A1W2PPD8 638 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 FXR1P51114 621 aaKnown RBP eCLIP13.5□□□□□ -0.25
NCDN-202ENST00000373243 SF3A3Q12874 501 aaKnown RBP eCLIP13.5□□□□□ -0.25
NCDN-202ENST00000373243 RNF187Q5TA31 235 aaPredicted RBP13.5□□□□□ -0.25
NCDN-202ENST00000373243 TCERG1LQ5VWI1 586 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 SND1Q7KZF4 910 aaKnown RBP eCLIP13.5□□□□□ -0.25
NCDN-202ENST00000373243 TRIML1Q8N9V2 468 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 ATRIPQ8WXE1 791 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 EPB41L4AQ9HCS5 686 aaPredicted RBP13.5□□□□□ -0.25
NCDN-202ENST00000373243 CD248Q9HCU0 757 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 TRIM10Q9UDY6 481 aa13.5□□□□□ -0.25
NCDN-202ENST00000373243 FBXO2Q9UK22 296 aaPredicted RBP13.5□□□□□ -0.25
NCDN-202ENST00000373243 MROH5Q6ZUA9 1318 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 B4DLN1 442 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 PPFIA4O75335 1185 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 CXCR5P32302 372 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 SAR1BQ9Y6B6 198 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 SHTN1A0MZ66 631 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 CCDC151A5D8V7 595 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 PP2D1A8MPX8 630 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 F8W031 263 aaPredicted RBP13.49□□□□□ -0.25
NCDN-202ENST00000373243 SMIM22K7EJ46 135 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 ATP2C2O75185 946 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 RPN1P04843 607 aaKnown RBP13.49□□□□□ -0.25
NCDN-202ENST00000373243 MAATS1Q7Z4T9 603 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 NLRC4Q9NPP4 1024 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 BMP2KQ9NSY1 1161 aaPredicted RBP13.49□□□□□ -0.25
NCDN-202ENST00000373243 TBC1D7Q9P0N9 293 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 RFX7Q2KHR2 1363 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 TMCO5BA8MYB1 307 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 MFAP3LO75121 409 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 TACC1O75410 805 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 CALM1P0DP23 149 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 CALM2P0DP24 149 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 CALM3P0DP25 149 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 CALML3P27482 149 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 ARMC3Q5W041 872 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 SMIM5Q71RC9 77 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 MIEF2Q96C03 454 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 CHP1Q99653 195 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.49□□□□□ -0.25
NCDN-202ENST00000373243 MRFAP1Q9Y605 127 aa13.49□□□□□ -0.25
NCDN-202ENST00000373243 CCNT1O60563 726 aaKnown RBP13.48□□□□□ -0.25
NCDN-202ENST00000373243 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 TAF4BQ92750 862 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 GSDMAQ96QA5 445 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 SALL1Q9NSC2 1324 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 RBM5P52756 815 aaKnown RBP eCLIP13.48□□□□□ -0.25
NCDN-202ENST00000373243 CKAP4Q07065 602 aaKnown RBP13.48□□□□□ -0.25
NCDN-202ENST00000373243 SUSD4Q5VX71 490 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 NBPF5PQ86XG9 351 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms