RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PTF1AQ7RTS3 328 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 TRIM50Q86XT4 487 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 ARHGAP18Q8N392 663 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 UHMK1Q8TAS1 419 aaKnown RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 MOV10L1Q9BXT6 1211 aaKnown RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 VCXQ9H320 206 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 RABL2AQ9UBK7 228 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 BARX2Q9UMQ3 279 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 CPSF1Q10570 1443 aaKnown RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 MYL5Q02045 173 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 SLC4A8Q2Y0W8 1093 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 CFAP58Q5T655 872 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 KDM7AQ6ZMT4 941 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 BPIFA3Q9BQP9 254 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 TAOK3Q9H2K8 898 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 GUCA1BQ9UMX6 200 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 CEP131Q9UPN4 1083 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 KIAA0232Q92628 1395 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 CHL1O00533 1208 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 HNRNPRO43390 633 aaKnown RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 PABPC4Q13310 644 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 QPCTQ16769 361 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 GKAP1Q5VSY0 366 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 SPECC1LQ69YQ0 1117 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 PPFIBP1Q86W92 1011 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 PALB2Q86YC2 1186 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 TAF4BQ92750 862 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 SLC35B4Q969S0 331 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 NR1H4Q96RI1 486 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-203ENST00000372917 IWS1Q96ST2 819 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 TCHPQ9BT92 498 aa11.8□□□□□ -0.52
TRERF1-203ENST00000372917 PPLO60437 1756 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 FLOT1O75955 427 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 CCND1P24385 295 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 RASIP1Q5U651 963 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 RAD9BQ6WBX8 426 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 NCCRP1Q6ZVX7 275 aaPredicted RBP11.79□□□□□ -0.52
TRERF1-203ENST00000372917 ZBTB8BQ8NAP8 495 aaPredicted RBP11.79□□□□□ -0.52
TRERF1-203ENST00000372917 FSD1Q9BTV5 496 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 VCX3BQ9H321 246 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 VCX3AQ9NNX9 186 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 CETN3O15182 167 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 JAK2O60674 1132 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 ATP8B2P98198 1209 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 ANO7Q6IWH7 933 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 ARHGEF25Q86VW2 580 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 PDLIM1O00151 329 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 FOXO3O43524 673 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 LDHAP00338 332 aaKnown RBP11.79□□□□□ -0.52
TRERF1-203ENST00000372917 ABL1P00519 1130 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 ZIM3Q96PE6 472 aa11.79□□□□□ -0.52
TRERF1-203ENST00000372917 AOX1Q06278 1338 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 AKR1B15C9JRZ8 316 aaPredicted RBP11.78□□□□□ -0.52
TRERF1-203ENST00000372917 ANXA1P04083 346 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 G2E3Q7L622 706 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 TMCO5AQ8N6Q1 288 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 SMYD1Q8NB12 490 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 TSEN2Q8NCE0 465 aaKnown RBP11.78□□□□□ -0.52
TRERF1-203ENST00000372917 NEK9Q8TD19 979 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 ATP8A1Q9Y2Q0 1164 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 UBN2Q6ZU65 1347 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 NAT2P11245 290 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 NDUFA8P51970 172 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 C2orf54Q08AI8 447 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 ALS2CLQ60I27 953 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
TRERF1-203ENST00000372917 USP28Q96RU2 1077 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 ADCY9O60503 1353 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 GPR75-ASB3A0A0A6YYF3 556 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 PALM3A6NDB9 673 aaPredicted RBP11.78□□□□□ -0.52
TRERF1-203ENST00000372917 TMEM221A6NGB7 291 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 MLH1P40692 756 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 TMED1Q13445 227 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 TSNAXIP1Q2TAA8 658 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 SMC1BQ8NDV3 1235 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 AIDAQ96BJ3 306 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 CLIP3Q96DZ5 547 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 CCDC43Q96MW1 224 aaKnown RBP11.78□□□□□ -0.52
TRERF1-203ENST00000372917 GPCPD1Q9NPB8 672 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 ASB3Q9Y575 518 aa11.78□□□□□ -0.52
TRERF1-203ENST00000372917 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.52
TRERF1-203ENST00000372917 TRIM21P19474 475 aaKnown RBP11.77□□□□□ -0.52
TRERF1-203ENST00000372917 KLC1Q07866 573 aa11.77□□□□□ -0.52
TRERF1-203ENST00000372917 DMPKQ09013 629 aa11.77□□□□□ -0.52
TRERF1-203ENST00000372917 RESTQ13127 1097 aa11.77□□□□□ -0.52
TRERF1-203ENST00000372917 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.52
TRERF1-203ENST00000372917 NLRP3Q96P20 1036 aa11.77□□□□□ -0.52
TRERF1-203ENST00000372917 GBP5Q96PP8 586 aa11.77□□□□□ -0.52
TRERF1-203ENST00000372917 TMCO1Q9UM00 188 aa11.77□□□□□ -0.52
TRERF1-203ENST00000372917 ZNF711Q9Y462 761 aa11.77□□□□□ -0.52
TRERF1-203ENST00000372917 MAP3K5Q99683 1374 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 TARSL2A2RTX5 802 aaKnown RBP11.77□□□□□ -0.53
TRERF1-203ENST00000372917 EIF3FO00303 357 aaPredicted RBP11.77□□□□□ -0.53
TRERF1-203ENST00000372917 SP100P23497 879 aaPredicted RBP11.77□□□□□ -0.53
TRERF1-203ENST00000372917 GSTT1P30711 240 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 FOXD4Q12950 439 aaPredicted RBP11.77□□□□□ -0.53
TRERF1-203ENST00000372917 FLIIQ13045 1269 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms