RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 COL24A1Q17RW2 1714 aa14.38□□□□□ -0.11
CTPS1-202ENST00000372621 CCDC66A2RUB6 948 aa14.38□□□□□ -0.11
CTPS1-202ENST00000372621 TSPY2A6NKD2 308 aa14.38□□□□□ -0.11
CTPS1-202ENST00000372621 H7C1D1 291 aa14.38□□□□□ -0.11
CTPS1-202ENST00000372621 TYW1BQ6NUM6 668 aa14.38□□□□□ -0.11
CTPS1-202ENST00000372621 IRS2Q9Y4H2 1338 aa14.38□□□□□ -0.11
CTPS1-202ENST00000372621 RGL2O15211 777 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 OAS2P29728 719 aaKnown RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 HIBADHP31937 336 aaKnown RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 TUBB4BP68371 445 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 DGKHQ86XP1 1220 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 NUP88Q99567 741 aaPredicted RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 ZSWIM4Q9H7M6 989 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 PUF60Q9UHX1 559 aaKnown RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 POLR3GO15318 223 aaPredicted RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 KLRC4O43908 158 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 KRT9P35527 623 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 STAT6P42226 847 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 RPS8P62241 208 aaKnown RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 KCNB1Q14721 858 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 SLC35G1Q2M3R5 365 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 KIF4BQ2VIQ3 1234 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 BEND6Q5SZJ8 279 aaPredicted RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 STAG2Q8N3U4 1231 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 ANKRD20A12PQ8NF67 263 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 ZNF507Q8TCN5 953 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 GPKOWQ92917 476 aaPredicted RBP eCLIP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 SMARCC1Q92922 1105 aaPredicted RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 PNKPQ96T60 521 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 NAPGQ99747 312 aaPredicted RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 ZCCHC17Q9NP64 241 aaKnown RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 TFCP2L1Q9NZI6 479 aa14.37□□□□□ -0.11
CTPS1-202ENST00000372621 REXO2Q9Y3B8 237 aaKnown RBP14.37□□□□□ -0.11
CTPS1-202ENST00000372621 ERICH4A6NGS2 130 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 PARP1P09874 1014 aaKnown RBP14.36□□□□□ -0.11
CTPS1-202ENST00000372621 NT5C2P49902 561 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 PMS1P54277 932 aaKnown RBP14.36□□□□□ -0.11
CTPS1-202ENST00000372621 AMPD2Q01433 879 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 TBC1D9BQ66K14 1250 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 WWC2Q6AWC2 1192 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 DAGLBQ8NCG7 672 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 MAD2L2Q9UI95 211 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 PCDHA6Q9UN73 950 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 MAPK8IP1Q9UQF2 711 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 PCDHA8Q9Y5H6 950 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 SBF2Q86WG5 1849 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 ROBO3Q96MS0 1386 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 POTEB2H3BUK9 544 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 KCNQ2O43526 872 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 GRM4Q14833 912 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 CHP1Q99653 195 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 KAT14Q9H8E8 782 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 A0A1W2PQC6 194 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 TRIM49BA6NDI0 452 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 TFRCP02786 760 aaKnown RBP14.36□□□□□ -0.11
CTPS1-202ENST00000372621 USP17L8P0C7I0 530 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 UBXN1Q04323 297 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 C12orf60Q5U649 245 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 MB21D1Q8N884 522 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 PNMA1Q8ND90 353 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 RASGRP4Q8TDF6 673 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 DNAJC7Q99615 494 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 TMEM60Q9H2L4 133 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 KBTBD4Q9NVX7 518 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 MCM9Q9NXL9 1143 aa14.36□□□□□ -0.11
CTPS1-202ENST00000372621 TTC26A0AVF1 554 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 MYL1P05976 194 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 TFAP4Q01664 338 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 SEMA3FQ13275 785 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 WHAMMP3Q1A5X7 153 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
CTPS1-202ENST00000372621 SLF1Q9BQI6 1058 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 ANKRD2Q9GZV1 360 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 LGALS16A8MUM7 142 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 RHOBTB3O94955 611 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 NDUFA10O95299 355 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 EEF1GP26641 437 aaKnown RBP14.35□□□□□ -0.11
CTPS1-202ENST00000372621 ST5P78524 1137 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 DTHD1Q6ZMT9 781 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 TXNRD3Q86VQ6 643 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 LRRC15Q8TF66 581 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 CCSER1Q9C0I3 900 aa14.35□□□□□ -0.11
CTPS1-202ENST00000372621 PP2D1A8MPX8 630 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 CYTH3O43739 400 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 GIMAP8Q8ND71 665 aaPredicted RBP14.34□□□□□ -0.11
CTPS1-202ENST00000372621 THAP9Q9H5L6 903 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 EPN1Q9Y6I3 576 aaPredicted RBP14.34□□□□□ -0.11
CTPS1-202ENST00000372621 SPATA31A5Q5VU36 1347 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 SPATA31A7Q8IWB4 1347 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 H3BQF6 201 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 L1RE1Q9UN81 338 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 GALNT17Q6IS24 598 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 WDR59Q6PJI9 974 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 BICDL1Q6ZP65 573 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 OR8K1Q8NGG5 319 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 TCP11L1Q9NUJ3 509 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 CAPN11Q9UMQ6 739 aa14.34□□□□□ -0.11
CTPS1-202ENST00000372621 NAV1Q8NEY1 1877 aa14.33□□□□□ -0.11
CTPS1-202ENST00000372621 STXBP3O00186 592 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms