RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 SMYD4Q8IYR2 804 aaPredicted RBP23.33■■□□□ 1.33
VEGFA-204ENST00000372064 PROM2Q8N271 834 aa23.33■■□□□ 1.33
VEGFA-204ENST00000372064 SPZ1Q9BXG8 430 aa23.33■■□□□ 1.33
VEGFA-204ENST00000372064 L2HGDHQ9H9P8 463 aa23.33■■□□□ 1.33
VEGFA-204ENST00000372064 KLRF2D3W0D1 207 aa23.32■■□□□ 1.32
VEGFA-204ENST00000372064 RIMBP2O15034 1052 aa23.32■■□□□ 1.32
VEGFA-204ENST00000372064 FOCADQ5VW36 1801 aa23.32■■□□□ 1.32
VEGFA-204ENST00000372064 CCDC194A0A1B0GVG4 234 aa23.32■■□□□ 1.32
VEGFA-204ENST00000372064 PPEF1O14829 653 aaPredicted RBP23.32■■□□□ 1.32
VEGFA-204ENST00000372064 CDC25AP30304 524 aa23.32■■□□□ 1.32
VEGFA-204ENST00000372064 KRT27Q7Z3Y8 459 aa23.32■■□□□ 1.32
VEGFA-204ENST00000372064 SLF2Q8IX21 1173 aa23.32■■□□□ 1.32
VEGFA-204ENST00000372064 STX17P56962 302 aa23.32■■□□□ 1.32
VEGFA-204ENST00000372064 BLZF1Q9H2G9 400 aa23.32■■□□□ 1.32
VEGFA-204ENST00000372064 STX10O60499 249 aa23.31■■□□□ 1.32
VEGFA-204ENST00000372064 NOVP48745 357 aa23.31■■□□□ 1.32
VEGFA-204ENST00000372064 TXNRD1Q16881 649 aa23.31■■□□□ 1.32
VEGFA-204ENST00000372064 REXO1L1PQ8IX06 675 aa23.31■■□□□ 1.32
VEGFA-204ENST00000372064 CEP95Q96GE4 821 aa23.31■■□□□ 1.32
VEGFA-204ENST00000372064 BAG1Q99933 345 aaPredicted RBP23.31■■□□□ 1.32
VEGFA-204ENST00000372064 ZNF215Q9UL58 517 aaPredicted RBP23.31■■□□□ 1.32
VEGFA-204ENST00000372064 DAGLAQ9Y4D2 1042 aa23.31■■□□□ 1.32
VEGFA-204ENST00000372064 USP17L2Q6R6M4 530 aa23.31■■□□□ 1.32
VEGFA-204ENST00000372064 SYT10Q6XYQ8 523 aa23.31■■□□□ 1.32
VEGFA-204ENST00000372064 INF2Q27J81 1249 aa23.3■■□□□ 1.32
VEGFA-204ENST00000372064 SP8Q8IXZ3 490 aa23.3■■□□□ 1.32
VEGFA-204ENST00000372064 ERO1AQ96HE7 468 aa23.3■■□□□ 1.32
VEGFA-204ENST00000372064 ADD3Q9UEY8 706 aaKnown RBP23.3■■□□□ 1.32
VEGFA-204ENST00000372064 PHLPP2Q6ZVD8 1323 aa23.3■■□□□ 1.32
VEGFA-204ENST00000372064 MYH1P12882 1939 aa23.3■■□□□ 1.32
VEGFA-204ENST00000372064 TXLNAP40222 546 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 PBX1P40424 430 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 ETF1P62495 437 aaKnown RBP23.29■■□□□ 1.32
VEGFA-204ENST00000372064 NAA30Q147X3 362 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-204ENST00000372064 CCDC93Q567U6 631 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 TRIM65Q6PJ69 517 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 CTAGE1Q96RT6 745 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 ZMYND12Q9H0C1 365 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 ZSCAN12O43309 604 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 SMARCA1P28370 1054 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 UBE2Q2Q8WVN8 375 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 TMEM60Q9H2L4 133 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 F8W031 263 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-204ENST00000372064 LAD1O00515 517 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 PARP1P09874 1014 aaKnown RBP23.29■■□□□ 1.32
VEGFA-204ENST00000372064 PICALMQ13492 652 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 HOMER1Q86YM7 354 aa23.29■■□□□ 1.32
VEGFA-204ENST00000372064 SLU7O95391 586 aaKnown RBP23.28■■□□□ 1.32
VEGFA-204ENST00000372064 PPP4R3BQ5MIZ7 849 aa23.28■■□□□ 1.32
VEGFA-204ENST00000372064 DTHD1Q6ZMT9 781 aa23.28■■□□□ 1.32
VEGFA-204ENST00000372064 DISC1Q9NRI5 854 aa23.28■■□□□ 1.32
VEGFA-204ENST00000372064 ATP6V0A2Q9Y487 856 aa23.28■■□□□ 1.32
VEGFA-204ENST00000372064 ADKP55263 362 aaKnown RBP23.28■■□□□ 1.32
VEGFA-204ENST00000372064 TMC4Q7Z404 712 aa23.28■■□□□ 1.32
VEGFA-204ENST00000372064 RMND1Q9NWS8 449 aa23.28■■□□□ 1.32
VEGFA-204ENST00000372064 RWDD2AQ9UIY3 292 aa23.28■■□□□ 1.32
VEGFA-204ENST00000372064 TEX33O43247 280 aa23.27■■□□□ 1.32
VEGFA-204ENST00000372064 PRPHP41219 470 aa23.27■■□□□ 1.32
VEGFA-204ENST00000372064 KARSQ15046 597 aaKnown RBP23.27■■□□□ 1.32
VEGFA-204ENST00000372064 ZNF658Q5TYW1 1059 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-204ENST00000372064 CTNND2Q9UQB3 1225 aa23.27■■□□□ 1.32
VEGFA-204ENST00000372064 PPP2R2CQ9Y2T4 447 aa23.27■■□□□ 1.32
VEGFA-204ENST00000372064 PLIN4Q96Q06 1357 aa23.27■■□□□ 1.32
VEGFA-204ENST00000372064 COA1Q9GZY4 146 aa23.27■■□□□ 1.32
VEGFA-204ENST00000372064 NAPAP54920 295 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 CERS5Q8N5B7 392 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 PANX2Q96RD6 677 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 VAT1LQ9HCJ6 419 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 RPN1P04843 607 aaKnown RBP23.26■■□□□ 1.31
VEGFA-204ENST00000372064 STAT6P42226 847 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 NAALADL2Q58DX5 795 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 CCDC12Q8WUD4 166 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-204ENST00000372064 CGNQ9P2M7 1197 aaKnown RBP23.26■■□□□ 1.31
VEGFA-204ENST00000372064 QSER1Q2KHR3 1735 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 PP2D1A8MPX8 630 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 RRAGBQ5VZM2 374 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 MXD3Q9BW11 206 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 CCSER1Q9C0I3 900 aa23.26■■□□□ 1.31
VEGFA-204ENST00000372064 COBLO75128 1261 aa23.25■■□□□ 1.31
VEGFA-204ENST00000372064 ARID3AQ99856 593 aa23.25■■□□□ 1.31
VEGFA-204ENST00000372064 LRRC10BA6NIK2 292 aa23.25■■□□□ 1.31
VEGFA-204ENST00000372064 USP17L5A8MUK1 530 aa23.25■■□□□ 1.31
VEGFA-204ENST00000372064 AKR1B15C9JRZ8 316 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-204ENST00000372064 ZC3H12CQ9C0D7 883 aaKnown RBP23.25■■□□□ 1.31
VEGFA-204ENST00000372064 UBA5Q9GZZ9 404 aa23.25■■□□□ 1.31
VEGFA-204ENST00000372064 LIMA1Q9UHB6 759 aaKnown RBP23.25■■□□□ 1.31
VEGFA-204ENST00000372064 GOLGA6L9A6NEM1 432 aa23.24■■□□□ 1.31
VEGFA-204ENST00000372064 SRGNP10124 158 aa23.24■■□□□ 1.31
VEGFA-204ENST00000372064 PAK1Q13153 545 aa23.24■■□□□ 1.31
VEGFA-204ENST00000372064 KRT25Q7Z3Z0 450 aa23.24■■□□□ 1.31
VEGFA-204ENST00000372064 RRP36Q96EU6 259 aaKnown RBP23.24■■□□□ 1.31
VEGFA-204ENST00000372064 DDX4Q9NQI0 724 aaKnown RBP23.24■■□□□ 1.31
VEGFA-204ENST00000372064 MYL1P05976 194 aa23.24■■□□□ 1.31
VEGFA-204ENST00000372064 PIGSQ96S52 555 aa23.24■■□□□ 1.31
VEGFA-204ENST00000372064 SUGT1Q9Y2Z0 365 aa23.24■■□□□ 1.31
VEGFA-204ENST00000372064 ITIH6Q6UXX5 1313 aa23.24■■□□□ 1.31
VEGFA-204ENST00000372064 BRWD3Q6RI45 1802 aa23.24■■□□□ 1.31
VEGFA-204ENST00000372064 SMCO2A6NFE2 343 aa23.23■■□□□ 1.31
VEGFA-204ENST00000372064 DOK7Q18PE1 504 aa23.23■■□□□ 1.31
VEGFA-204ENST00000372064 FILIP1LQ4L180 1135 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms