RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 RASIP1Q5U651 963 aa18.58■□□□□ 0.56
SSR4-204ENST00000370087 C16orf86Q6ZW13 317 aa18.58■□□□□ 0.56
SSR4-204ENST00000370087 FTSJ3Q8IY81 847 aaKnown RBP18.58■□□□□ 0.56
SSR4-204ENST00000370087 RHPN1Q8TCX5 695 aa18.58■□□□□ 0.56
SSR4-204ENST00000370087 PRDM12Q9H4Q4 367 aa18.58■□□□□ 0.56
SSR4-204ENST00000370087 RIPK3Q9Y572 518 aa18.58■□□□□ 0.56
SSR4-204ENST00000370087 MYH4Q9Y623 1939 aa18.58■□□□□ 0.56
SSR4-204ENST00000370087 DCDC2CA8MYV0 355 aa18.57■□□□□ 0.56
SSR4-204ENST00000370087 ACRP10323 421 aa18.57■□□□□ 0.56
SSR4-204ENST00000370087 ADGRE1Q14246 886 aa18.57■□□□□ 0.56
SSR4-204ENST00000370087 MFSD5Q6N075 450 aa18.57■□□□□ 0.56
SSR4-204ENST00000370087 ERC1Q8IUD2 1116 aa18.57■□□□□ 0.56
SSR4-204ENST00000370087 ZHX1Q9UKY1 873 aaPredicted RBP18.57■□□□□ 0.56
SSR4-204ENST00000370087 CNPY2Q9Y2B0 182 aa18.57■□□□□ 0.56
SSR4-204ENST00000370087 DNAJC25-GNG10A0A024R161 153 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 MOXD2PA6NHM9 499 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 USP17L12C9JPN9 530 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 USP17L21D6R901 530 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 APBB1O00213 710 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 RAD21O60216 631 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 CSF2RAP15509 400 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 ADD2P35612 726 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 CDK7P50613 346 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.56■□□□□ 0.56
SSR4-204ENST00000370087 NUP133Q8WUM0 1156 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 CCDC17Q96LX7 622 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 FGD4Q96M96 766 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 ATP8A2Q9NTI2 1148 aa18.56■□□□□ 0.56
SSR4-204ENST00000370087 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
SSR4-204ENST00000370087 SYNGAP1Q96PV0 1343 aa18.55■□□□□ 0.56
SSR4-204ENST00000370087 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
SSR4-204ENST00000370087 FAM184BQ9ULE4 1060 aa18.55■□□□□ 0.56
SSR4-204ENST00000370087 ASGR1P07306 291 aa18.54■□□□□ 0.56
SSR4-204ENST00000370087 CST5P28325 142 aaPredicted RBP18.54■□□□□ 0.56
SSR4-204ENST00000370087 PPIGQ13427 754 aaKnown RBP eCLIP18.54■□□□□ 0.567e-9■□□□□ 8.7
SSR4-204ENST00000370087 SNRNP48Q6IEG0 339 aaKnown RBP18.54■□□□□ 0.56
SSR4-204ENST00000370087 MAMDC4Q6UXC1 1216 aa18.54■□□□□ 0.56
SSR4-204ENST00000370087 CCDC129Q6ZRS4 1044 aa18.54■□□□□ 0.56
SSR4-204ENST00000370087 PPP1R12CQ9BZL4 782 aa18.54■□□□□ 0.56
SSR4-204ENST00000370087 KANSL2Q9H9L4 492 aa18.54■□□□□ 0.56
SSR4-204ENST00000370087 GOPCQ9HD26 462 aa18.54■□□□□ 0.56
SSR4-204ENST00000370087 CTAGE5O15320 804 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 DUSP11O75319 330 aaKnown RBP18.53■□□□□ 0.56
SSR4-204ENST00000370087 C6orf222P0C671 652 aaPredicted RBP18.53■□□□□ 0.56
SSR4-204ENST00000370087 COPB2P35606 906 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 CCDC85BQ15834 202 aaPredicted RBP18.53■□□□□ 0.56
SSR4-204ENST00000370087 CTR9Q6PD62 1173 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 ZNF365Q70YC5 407 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 FAM126BQ8IXS8 530 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 MSL3Q8N5Y2 521 aaKnown RBP18.53■□□□□ 0.56
SSR4-204ENST00000370087 PANK1Q8TE04 598 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 ADAMTS19Q8TE59 1207 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 GAS2L1Q99501 681 aaPredicted RBP18.53■□□□□ 0.56
SSR4-204ENST00000370087 SLF1Q9BQI6 1058 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 TEX13BQ9BXU2 312 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 UPF3AQ9H1J1 476 aaKnown RBP18.53■□□□□ 0.56
SSR4-204ENST00000370087 PAG1Q9NWQ8 432 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 CXXC1Q9P0U4 656 aaPredicted RBP18.53■□□□□ 0.56
SSR4-204ENST00000370087 THEGQ9P2T0 379 aa18.53■□□□□ 0.56
SSR4-204ENST00000370087 MYO9BQ13459 2157 aa18.52■□□□□ 0.56
SSR4-204ENST00000370087 ELP1O95163 1332 aa18.52■□□□□ 0.56
SSR4-204ENST00000370087 TCF20Q9UGU0 1960 aaKnown RBP18.52■□□□□ 0.56
SSR4-204ENST00000370087 ACVR2BQ13705 512 aa18.52■□□□□ 0.56
SSR4-204ENST00000370087 AKNAD1Q5T1N1 836 aa18.52■□□□□ 0.56
SSR4-204ENST00000370087 GLT1D1Q96MS3 346 aa18.52■□□□□ 0.56
SSR4-204ENST00000370087 ASB2Q96Q27 587 aa18.52■□□□□ 0.56
SSR4-204ENST00000370087 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
SSR4-204ENST00000370087 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.52■□□□□ 0.56
SSR4-204ENST00000370087 YBX2Q9Y2T7 364 aaKnown RBP18.52■□□□□ 0.56
SSR4-204ENST00000370087 UMODL1Q5DID0 1318 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 MROH7Q68CQ1 1323 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 LCTP09848 1927 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 ARVCFO00192 962 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 NDUFB10O96000 172 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 PTGS1P23219 599 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 CYP2C18P33260 490 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 CCDC144BQ3MJ40 725 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 ATXN2LQ8WWM7 1075 aaKnown RBP18.51■□□□□ 0.55
SSR4-204ENST00000370087 DDX11Q96FC9 970 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 KATNBL1Q9H079 304 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 NKX2-4Q9H2Z4 354 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
SSR4-204ENST00000370087 ASTN1O14525 1302 aa18.5■□□□□ 0.55
SSR4-204ENST00000370087 A0A0U1RQG5 324 aaPredicted RBP18.5■□□□□ 0.55
SSR4-204ENST00000370087 CCER2I3L3R5 266 aa18.5■□□□□ 0.55
SSR4-204ENST00000370087 IFIT2P09913 472 aaKnown RBP18.5■□□□□ 0.55
SSR4-204ENST00000370087 RASA1P20936 1047 aa18.5■□□□□ 0.55
SSR4-204ENST00000370087 GJA9P57773 515 aa18.5■□□□□ 0.55
SSR4-204ENST00000370087 ZNF467Q7Z7K2 595 aaPredicted RBP18.5■□□□□ 0.55
SSR4-204ENST00000370087 SIRT2Q8IXJ6 389 aa18.5■□□□□ 0.55
SSR4-204ENST00000370087 CPXCR1Q8N123 301 aa18.5■□□□□ 0.55
SSR4-204ENST00000370087 STK11IPQ8N1F8 1099 aa18.5■□□□□ 0.55
SSR4-204ENST00000370087 CLASRPQ8N2M8 674 aaKnown RBP18.5■□□□□ 0.55
SSR4-204ENST00000370087 BDP1A6H8Y1 2624 aa18.5■□□□□ 0.55
SSR4-204ENST00000370087 TRANK1O15050 2925 aa18.5■□□□□ 0.55
SSR4-204ENST00000370087 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.49■□□□□ 0.55
SSR4-204ENST00000370087 CD4P01730 458 aa18.49■□□□□ 0.55
SSR4-204ENST00000370087 BEX3Q00994 111 aa18.49■□□□□ 0.55
SSR4-204ENST00000370087 HSP90AB4PQ58FF6 505 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms