RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 PTCD1O75127 700 aaKnown RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 FAM13AO94988 1023 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 SYF2O95926 243 aaKnown RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 GGCXP38435 758 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 DHX9Q08211 1270 aaKnown RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 USP37Q86T82 979 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 P3H4Q92791 437 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 CARD10Q9BWT7 1032 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 DNAI2Q9GZS0 605 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 IFT122Q9HBG6 1241 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 MAP3K2Q9Y2U5 619 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 SH3BP5O60239 455 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 ESRRAP11474 423 aaPredicted RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 SCP2P22307 547 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 HNRNPH1P31943 449 aaKnown RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 KRT2P35908 639 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 SNX16P57768 344 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 PSMC1P62191 440 aaKnown RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 SFMBT2Q5VUG0 894 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 SYCE1Q8N0S2 351 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 GDAP1Q8TB36 358 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 RRP36Q96EU6 259 aaKnown RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 DTNBP1Q96EV8 351 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 LBHD1Q9BQE6 289 aaPredicted RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 DBF4Q9UBU7 674 aaPredicted RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 USTQ9Y2C2 406 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 CAND2O75155 1236 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 CCDC159P0C7I6 412 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 PFKFB1P16118 471 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 TATP17735 454 aaPredicted RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 ADCY8P40145 1251 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 CASC4Q6P4E1 433 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 C11orf57Q6ZUT1 292 aaPredicted RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 TOM1L2Q6ZVM7 507 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 ZNF354CQ86Y25 554 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 DIS3L2Q8IYB7 885 aaKnown RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 MRPL50Q8N5N7 158 aaKnown RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 PPP4R1Q8TF05 950 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 BLZF1Q9H2G9 400 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 SERTAD1Q9UHV2 236 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 KRT75O95678 551 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 PLTPP55058 493 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 ADALQ6DHV7 355 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 ESR2Q92731 530 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 KRT23Q9C075 422 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 DRC3Q9H069 523 aa9.39□□□□□ -0.91
LCA5-201ENST00000369846 TRPC5Q9UL62 973 aaPredicted RBP9.39□□□□□ -0.91
LCA5-201ENST00000369846 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.39□□□□□ -0.91
LCA5-201ENST00000369846 LAMC1P11047 1609 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 RNF17Q9BXT8 1623 aaKnown RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 IQGAP1P46940 1657 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 TSPY3P0CV98 308 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 TSPY8P0CW00 308 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 SLC8A3P57103 927 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 TSPY1Q01534 308 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 RPS6KA2Q15349 733 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 ALS2CLQ60I27 953 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 ARHGAP18Q8N392 663 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 ACRBPQ8NEB7 543 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 TTLL11Q8NHH1 800 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 ZKSCAN3Q9BRR0 538 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 MAK16Q9BXY0 300 aaKnown RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 MYO1AQ9UBC5 1043 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 MEFVO15553 781 aaPredicted RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 SKAP2O75563 359 aaPredicted RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 RPL13P26373 211 aaKnown RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 NEK2P51955 445 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 NAPAP54920 295 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 IL1RL1Q01638 556 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 ANKRD20A4Q4UJ75 823 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 ANKRD20A8PQ5CZ79 823 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 ANKRD20A2Q5SQ80 823 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 ANKRD20A1Q5TYW2 823 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 LDHAL6AQ6ZMR3 332 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 TMTC3Q6ZXV5 915 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 CCDC125Q86Z20 511 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 SIRT2Q8IXJ6 389 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 HIC2Q96JB3 615 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 PDLIM2Q96JY6 352 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 EIF2AQ9BY44 585 aaKnown RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 IMPG2Q9BZV3 1241 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 CCDC68Q9H2F9 335 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 WARS2Q9UGM6 360 aaKnown RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 TBK1Q9UHD2 729 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 MRC2Q9UBG0 1479 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 RNASELQ05823 741 aaKnown RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 LAMB3Q13751 1172 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 DPCR1Q3MIW9 517 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 PALM2Q8IXS6 379 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 CRACR2BQ8N4Y2 399 aaPredicted RBP9.38□□□□□ -0.91
LCA5-201ENST00000369846 TTC1Q99614 292 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 NPC1L1Q9UHC9 1359 aa9.38□□□□□ -0.91
LCA5-201ENST00000369846 SLC27A2O14975 620 aa9.37□□□□□ -0.91
LCA5-201ENST00000369846 ATF3P18847 181 aa9.37□□□□□ -0.91
LCA5-201ENST00000369846 CALML3P27482 149 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1096.8 ms