RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 DOCK2Q92608 1830 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 ENC1O14682 589 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 CDC25AP30304 524 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 GUCY1A2P33402 732 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 CYLC1P35663 651 aaPredicted RBP11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 NNTQ13423 1086 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 HSP90AB3PQ58FF7 597 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 EMBQ6PCB8 327 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 MICALCLQ6ZW33 695 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 CAGE1Q8TC20 777 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 VPS16Q9H269 839 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 TAB2Q9NYJ8 693 aa11.79□□□□□ -0.52
LYSMD1-201ENST00000368908 SBF2Q86WG5 1849 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 PCDH11XQ9BZA7 1347 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 PCDH11YQ9BZA8 1340 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 SRRM3A6NNA2 597 aaPredicted RBP11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 LGALS16A8MUM7 142 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 UBE2Q2LH0YL09 131 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 EPHB4P54760 987 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 APBA1Q02410 837 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 EMC10Q5UCC4 262 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 FBXW10Q5XX13 1052 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 ANKRD18AQ8IVF6 992 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 CCDC170Q8IYT3 715 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 SYMPKQ92797 1274 aaKnown RBP11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 CAVIN3Q969G5 261 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 MYL10Q9BUA6 226 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 GGA2Q9UJY4 613 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 LUC7L2Q9Y383 392 aaKnown RBP11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 NHSQ6T4R5 1651 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 ARAP2Q8WZ64 1704 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 RIC1Q4ADV7 1423 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 TTC26A0AVF1 554 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 CLGNO14967 610 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 C21orf2O43822 256 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 KIAA0754O94854 1291 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 PRLRP16471 622 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 NR5A1Q13285 461 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 KIAA1328Q86T90 577 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 CRACR2BQ8N4Y2 399 aaPredicted RBP11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 TSGA10Q9BZW7 698 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 KRT23Q9C075 422 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 RMND1Q9NWS8 449 aa11.78□□□□□ -0.52
LYSMD1-201ENST00000368908 XDHP47989 1333 aa11.77□□□□□ -0.52
LYSMD1-201ENST00000368908 H7C1D1 291 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 PDE2AO00408 941 aaPredicted RBP11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 MEFVO15553 781 aaPredicted RBP11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 SRGAP2O75044 1071 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 UBXN1Q04323 297 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 ZNF658Q5TYW1 1059 aaPredicted RBP11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 RRAGBQ5VZM2 374 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 SND1Q7KZF4 910 aaKnown RBP eCLIP11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 GSPT2Q8IYD1 628 aaKnown RBP11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 SMYD4Q8IYR2 804 aaPredicted RBP11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 IFNL2Q8IZJ0 200 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 MB21D1Q8N884 522 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 CAPZA3Q96KX2 299 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 GNL3LQ9NVN8 582 aaKnown RBP11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 PDS5AQ29RF7 1337 aaKnown RBP11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 GPTP24298 496 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 CCDC57Q2TAC2 916 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 WDR59Q6PJI9 974 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 NELFBQ8WX92 580 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 DCAF5Q96JK2 942 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 CABP5Q9NP86 173 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 CAPN7Q9Y6W3 813 aa11.77□□□□□ -0.53
LYSMD1-201ENST00000368908 HSF2BPO75031 334 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 EEF1GP26641 437 aaKnown RBP11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 CDK17Q00537 523 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 PPP2R5BQ15173 497 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 TMTC2Q8N394 836 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 OTUD6BQ8N6M0 293 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 MARCH10Q8NA82 808 aaPredicted RBP11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 RETREG2Q8NC44 543 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 C1orf131Q8NDD1 294 aaKnown RBP11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 ZNF507Q8TCN5 953 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 OXER1Q8TDS5 423 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 RUFY1Q96T51 708 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 NUP58Q9BVL2 599 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 RNF26Q9BY78 433 aaPredicted RBP11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 ZSWIM5Q9P217 1185 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 SNX12Q9UMY4 172 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 BCORQ6W2J9 1755 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 TNS1Q9HBL0 1735 aaKnown RBP11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 NDUFAB1O14561 156 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 ZMYND10O75800 440 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 IPO7O95373 1038 aaKnown RBP11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 XBP1P17861 261 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 MCAMP43121 646 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 C2orf54Q08AI8 447 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 SEMA3FQ13275 785 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 DRP2Q13474 957 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 PDXDC2PQ6P474 469 aa11.76□□□□□ -0.53
LYSMD1-201ENST00000368908 KDM7AQ6ZMT4 941 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms