RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 PRAMEF22A3QJZ6 481 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 FAM221BA6H8Z2 402 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 TRIM64A6NGJ6 449 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 TRIM64BA6NI03 449 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 ERVV-2B6SEH9 535 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 CYP2E1P05181 493 aaPredicted RBP11.26□□□□□ -0.61
SCNM1-202ENST00000368905 MYL6BP14649 208 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 NEK3P51956 506 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 CUL4AQ13619 759 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 GCKRQ14397 625 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 PKN2Q16513 984 aaKnown RBP11.26□□□□□ -0.61
SCNM1-202ENST00000368905 HIBCHQ6NVY1 386 aaPredicted RBP11.26□□□□□ -0.61
SCNM1-202ENST00000368905 AACSQ86V21 672 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 UNC5CLQ8IV45 518 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 CCDC144CPQ8IYA2 1237 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 ANKRD49Q8WVL7 239 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 TMX3Q96JJ7 454 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 HERPUD2Q9BSE4 406 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 MAK16Q9BXY0 300 aaKnown RBP11.26□□□□□ -0.61
SCNM1-202ENST00000368905 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
SCNM1-202ENST00000368905 ATP6V0A2Q9Y487 856 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 PCDHGB7Q9Y5F8 929 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 C5P01031 1676 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 COL22A1Q8NFW1 1626 aaPredicted RBP11.26□□□□□ -0.61
SCNM1-202ENST00000368905 F8VZ95 297 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 TOR1BO14657 336 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 AGR2O95994 175 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 F2P00734 622 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 VARSP26640 1264 aaKnown RBP11.26□□□□□ -0.61
SCNM1-202ENST00000368905 KLHL40Q2TBA0 621 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 PLBD1Q6P4A8 553 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 MZT2AQ6P582 158 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 MILR1Q7Z6M3 343 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 ZIM2Q9NZV7 527 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 FBXL5Q9UKA1 691 aa11.26□□□□□ -0.61
SCNM1-202ENST00000368905 LAMB4A4D0S4 1761 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 IGKV5-2P06315 115 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 RAB27AP51159 221 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 RABL6Q3YEC7 729 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 TOM1L2Q6ZVM7 507 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 GLYCTKQ8IVS8 523 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 AFAP1L1Q8TED9 768 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 RSAD2Q8WXG1 361 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 ZNF75CPQ92670 426 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 CEP95Q96GE4 821 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 MYD88Q99836 296 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 VEZTQ9HBM0 779 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 GPHNQ9NQX3 736 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 BLOC1S6Q9UL45 172 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 PNMA8BQ9ULN7 279 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 SUFUQ9UMX1 484 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 SQORQ9Y6N5 450 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 JCADQ9P266 1359 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 LINC00854A0A1B0GVQ3 168 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 ESYT3A0FGR9 886 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 SPTLC2O15270 562 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 RACK1P63244 317 aaKnown RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 RBM6P78332 1123 aaKnown RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 TTC31Q49AM3 519 aaPredicted RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 RILPL1Q5EBL4 403 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 MZT2BQ6NZ67 158 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 RGL4Q8IZJ4 473 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 LILRB2Q8N423 598 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 PLBD2Q8NHP8 589 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 TBC1D22AQ8WUA7 517 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 CLP1Q92989 425 aaKnown RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 NUDT12Q9BQG2 462 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 DEF6Q9H4E7 631 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 CPSF2Q9P2I0 782 aaKnown RBP11.25□□□□□ -0.61
SCNM1-202ENST00000368905 TRPC6Q9Y210 931 aa11.25□□□□□ -0.61
SCNM1-202ENST00000368905 C2orf81A6NN90 581 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 DPYSL4O14531 572 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
SCNM1-202ENST00000368905 BTF3P20290 206 aaKnown RBP11.24□□□□□ -0.61
SCNM1-202ENST00000368905 TAF1CQ15572 869 aaPredicted RBP11.24□□□□□ -0.61
SCNM1-202ENST00000368905 KCT2Q8NC54 265 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 MAML1Q92585 1016 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 ABCA3Q99758 1704 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 NACA2Q9H009 215 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 LSG1Q9H089 658 aaKnown RBP11.24□□□□□ -0.61
SCNM1-202ENST00000368905 COPRSQ9NQ92 184 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 RNF19AQ9NV58 838 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 SNTG2Q9NY99 539 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
SCNM1-202ENST00000368905 RASSF10A6NK89 507 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 MUSKO15146 869 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 STK3Q13188 491 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 DACT2Q5SW24 774 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 LLGL2Q6P1M3 1020 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 CWC27Q6UX04 472 aaKnown RBP11.23□□□□□ -0.61
SCNM1-202ENST00000368905 RSRC2Q7L4I2 434 aaKnown RBP11.23□□□□□ -0.61
SCNM1-202ENST00000368905 NEK1Q96PY6 1258 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 ZNF304Q9HCX3 659 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 PIH1D1Q9NWS0 290 aaKnown RBP11.23□□□□□ -0.61
SCNM1-202ENST00000368905 QPCTLQ9NXS2 382 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 VTI1BQ9UEU0 232 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms