RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 FBXO28Q9NVF7 368 aa12.42□□□□□ -0.42
CLRN3-201ENST00000368671 PRKAG2Q9UGJ0 569 aa12.42□□□□□ -0.42
CLRN3-201ENST00000368671 ATP11BQ9Y2G3 1177 aa12.42□□□□□ -0.42
CLRN3-201ENST00000368671 ZNFX1Q9P2E3 1918 aaKnown RBP12.42□□□□□ -0.42
CLRN3-201ENST00000368671 GREB1LQ9C091 1923 aaPredicted RBP12.41□□□□□ -0.42
CLRN3-201ENST00000368671 SEPT4O43236 478 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 SLC25A27O95847 323 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 FCER1AP12319 257 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 FAM83BQ5T0W9 1011 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 GPR153Q6NV75 609 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 ABRAQ8N0Z2 381 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 ARRDC4Q8NCT1 418 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 MMP19Q99542 508 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 KANSL2Q9H9L4 492 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
CLRN3-201ENST00000368671 ARPP21Q9UBL0 812 aaPredicted RBP12.41□□□□□ -0.42
CLRN3-201ENST00000368671 SLC39A5Q6ZMH5 540 aa12.4□□□□□ -0.42
CLRN3-201ENST00000368671 PRDM5Q9NQX1 630 aaPredicted RBP12.4□□□□□ -0.42
CLRN3-201ENST00000368671 ECHDC1Q9NTX5 307 aa12.4□□□□□ -0.42
CLRN3-201ENST00000368671 CEP290O15078 2479 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 MINDY4BA8MYZ0 360 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 ST18O60284 1047 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 PGK2P07205 417 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 KCTD2Q14681 263 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 TRIM60Q495X7 471 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 FAM47AQ5JRC9 791 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 RIOX2Q8IUF8 465 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 FERMT2Q96AC1 680 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 STRBPQ96SI9 672 aaKnown RBP12.39□□□□□ -0.43
CLRN3-201ENST00000368671 NUP88Q99567 741 aaPredicted RBP12.39□□□□□ -0.43
CLRN3-201ENST00000368671 MKNK2Q9HBH9 465 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 ADAMTS5Q9UNA0 930 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 MYH4Q9Y623 1939 aa12.39□□□□□ -0.43
CLRN3-201ENST00000368671 VWA5AO00534 786 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 DLL1O00548 723 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 RASA1P20936 1047 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 STAT3P40763 770 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 ADCYAP1R1P41586 468 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 FOXK1P85037 733 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 LRRC41Q15345 812 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 KBTBD3Q8NAB2 608 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 APPBP2Q92624 585 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 GPATCH3Q96I76 525 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLRN3-201ENST00000368671 MTMR10Q9NXD2 777 aa12.38□□□□□ -0.43
CLRN3-201ENST00000368671 ZNF214Q9UL59 606 aaPredicted RBP12.38□□□□□ -0.43
CLRN3-201ENST00000368671 GSG1L2A8MUP6 293 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 RARBP10826 455 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 ZNF792Q3KQV3 632 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 SBK1Q52WX2 424 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 REPS2Q8NFH8 660 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 SLF1Q9BQI6 1058 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 TINF2Q9BSI4 451 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 XPNPEP3Q9NQH7 507 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 STXBP5LQ9Y2K9 1186 aa12.37□□□□□ -0.43
CLRN3-201ENST00000368671 ROBO3Q96MS0 1386 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 F5H6K3 240 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 M0R2C6 588 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 RNF113AO15541 343 aaKnown RBP12.36□□□□□ -0.43
CLRN3-201ENST00000368671 GPAA1O43292 621 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 PGK1P00558 417 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 APPP05067 770 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 TAL1P17542 331 aaPredicted RBP12.36□□□□□ -0.43
CLRN3-201ENST00000368671 COPB2P35606 906 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 TDO2P48775 406 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 KLRC3Q07444 240 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 SNRNP48Q6IEG0 339 aaKnown RBP12.36□□□□□ -0.43
CLRN3-201ENST00000368671 BADQ92934 168 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 LENG1Q96BZ8 264 aaPredicted RBP12.36□□□□□ -0.43
CLRN3-201ENST00000368671 FAM161BQ96MY7 647 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 DCTPP1Q9H773 170 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 EPB41L4AQ9HCS5 686 aaPredicted RBP12.36□□□□□ -0.43
CLRN3-201ENST00000368671 PDLIM7Q9NR12 457 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 NYAP2Q9P242 653 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 CLIP2Q9UDT6 1046 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 DIS3Q9Y2L1 958 aaKnown RBP12.36□□□□□ -0.43
CLRN3-201ENST00000368671 CTDP1Q9Y5B0 961 aaPredicted RBP12.36□□□□□ -0.43
CLRN3-201ENST00000368671 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
CLRN3-201ENST00000368671 PRDM1O75626 825 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 NDUFB10O96000 172 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 AKR1A1P14550 325 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 SNX17Q15036 470 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 SHHQ15465 462 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 GIMAP6Q6P9H5 292 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 SH3RF1Q7Z6J0 888 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 RNF180Q86T96 592 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 ZNF444Q8N0Y2 327 aaPredicted RBP12.35□□□□□ -0.43
CLRN3-201ENST00000368671 CPXCR1Q8N123 301 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 DDX11Q96FC9 970 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 NRBP1Q9UHY1 535 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 RIPK3Q9Y572 518 aa12.35□□□□□ -0.43
CLRN3-201ENST00000368671 TRIM43BA6NCK2 446 aa12.34□□□□□ -0.43
CLRN3-201ENST00000368671 ZBED4O75132 1171 aa12.34□□□□□ -0.43
CLRN3-201ENST00000368671 ZFYP08048 801 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms