RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SYDE2Q5VT97 1194 aa14.21□□□□□ -0.13
TUBE1-202ENST00000368662 KRT40Q6A162 431 aa14.21□□□□□ -0.13
TUBE1-202ENST00000368662 HOMER1Q86YM7 354 aa14.21□□□□□ -0.13
TUBE1-202ENST00000368662 CCDC148Q8NFR7 591 aa14.21□□□□□ -0.13
TUBE1-202ENST00000368662 TNPO1Q92973 898 aaKnown RBP14.21□□□□□ -0.13
TUBE1-202ENST00000368662 MTMR8Q96EF0 704 aa14.21□□□□□ -0.13
TUBE1-202ENST00000368662 AIFM3Q96NN9 605 aa14.21□□□□□ -0.13
TUBE1-202ENST00000368662 PIGSQ96S52 555 aa14.21□□□□□ -0.13
TUBE1-202ENST00000368662 CPVLQ9H3G5 476 aa14.21□□□□□ -0.13
TUBE1-202ENST00000368662 VAT1LQ9HCJ6 419 aa14.21□□□□□ -0.13
TUBE1-202ENST00000368662 BAZ2BQ9UIF8 2168 aaKnown RBP14.21□□□□□ -0.14
TUBE1-202ENST00000368662 hCG_1642624A0A1W2PR95 340 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 UBE2Q2LH0YL09 131 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 VCAM1P19320 739 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 SLC16A2P36021 539 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 PPIL2Q13356 520 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 MOB2Q70IA6 237 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 EMILIN3Q9NT22 766 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 BARHL2Q9NY43 387 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 PHIPQ8WWQ0 1821 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 CXCL11O14625 94 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 MMP1P03956 469 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 HMGCS2P54868 508 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 TRAF1Q13077 416 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 PIBF1Q8WXW3 757 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 CLMNQ96JQ2 1002 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 GBP4Q96PP9 640 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 BRMS1Q9HCU9 246 aa14.2□□□□□ -0.14
TUBE1-202ENST00000368662 CALML3P27482 149 aa14.19□□□□□ -0.14
TUBE1-202ENST00000368662 FOSBP53539 338 aa14.19□□□□□ -0.14
TUBE1-202ENST00000368662 GUCY1B3Q02153 619 aa14.19□□□□□ -0.14
TUBE1-202ENST00000368662 MCTP1Q6DN14 999 aa14.19□□□□□ -0.14
TUBE1-202ENST00000368662 GALNT17Q6IS24 598 aa14.19□□□□□ -0.14
TUBE1-202ENST00000368662 CLEC17AQ6ZS10 378 aa14.19□□□□□ -0.14
TUBE1-202ENST00000368662 HEATR3Q7Z4Q2 680 aa14.19□□□□□ -0.14
TUBE1-202ENST00000368662 SLC10A4Q96EP9 437 aa14.19□□□□□ -0.14
TUBE1-202ENST00000368662 VPS54Q9P1Q0 977 aa14.19□□□□□ -0.14
TUBE1-202ENST00000368662 GNL2Q13823 731 aaKnown RBP14.18□□□□□ -0.14
TUBE1-202ENST00000368662 FOXD4L5Q5VV16 416 aaPredicted RBP14.18□□□□□ -0.14
TUBE1-202ENST00000368662 WWC2Q6AWC2 1192 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 OTUD7BQ6GQQ9 843 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 PPP1R18Q6NYC8 613 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 BRAPQ7Z569 592 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 PRPF38AQ8NAV1 312 aaKnown RBP14.18□□□□□ -0.14
TUBE1-202ENST00000368662 SMC1BQ8NDV3 1235 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 FOXD4L4Q8WXT5 416 aaPredicted RBP14.18□□□□□ -0.14
TUBE1-202ENST00000368662 OTUD5Q96G74 571 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 PHF20Q9BVI0 1012 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 PRR12Q9ULL5 1215 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 KCNH4Q9UQ05 1017 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 IRF6O14896 467 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 FDX1P10109 184 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 FMR1Q06787 632 aaKnown RBP eCLIP14.18□□□□□ -0.14
TUBE1-202ENST00000368662 CDC37Q16543 378 aaPredicted RBP14.18□□□□□ -0.14
TUBE1-202ENST00000368662 PROCA1Q8NCQ7 364 aaPredicted RBP14.18□□□□□ -0.14
TUBE1-202ENST00000368662 OPTNQ96CV9 577 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 SLF1Q9BQI6 1058 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 FOXP1Q9H334 677 aaPredicted RBP14.18□□□□□ -0.14
TUBE1-202ENST00000368662 RPAP3Q9H6T3 665 aaPredicted RBP14.18□□□□□ -0.14
TUBE1-202ENST00000368662 GJB4Q9NTQ9 266 aa14.18□□□□□ -0.14
TUBE1-202ENST00000368662 A0A0G2JLL6 359 aaPredicted RBP14.17□□□□□ -0.14
TUBE1-202ENST00000368662 STXBP3O00186 592 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 KIF3CO14782 793 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 NAPAP54920 295 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 NLRP5P59047 1200 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 KIF23Q02241 960 aaPredicted RBP14.17□□□□□ -0.14
TUBE1-202ENST00000368662 PRRT2Q7Z6L0 340 aaPredicted RBP14.17□□□□□ -0.14
TUBE1-202ENST00000368662 FERMT3Q86UX7 667 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 GPKOWQ92917 476 aaPredicted RBP eCLIP14.17□□□□□ -0.146e-6■■□□□ 12
TUBE1-202ENST00000368662 KIFC2Q96AC6 838 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 U2AF2P26368 475 aaKnown RBP eCLIP14.17□□□□□ -0.141e-7■■■■■ 32.1
TUBE1-202ENST00000368662 GNA11P29992 359 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 RESTQ13127 1097 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 QRICH1Q2TAL8 776 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 DIS3L2Q8IYB7 885 aaKnown RBP14.17□□□□□ -0.14
TUBE1-202ENST00000368662 AMNQ9BXJ7 453 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 RANBP17Q9H2T7 1088 aaKnown RBP14.17□□□□□ -0.14
TUBE1-202ENST00000368662 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.17□□□□□ -0.14
TUBE1-202ENST00000368662 PNMA2Q9UL42 364 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 KCNJ14Q9UNX9 436 aa14.17□□□□□ -0.14
TUBE1-202ENST00000368662 ESYT2A0FGR8 921 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 USP17L15C9J2P7 530 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 USP17L13C9JLJ4 530 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 USP17L11C9JVI0 530 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 USP17L18D6R9N7 530 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 USP17L22D6RA61 530 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 USP17L17D6RBQ6 530 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 USP17L19D6RCP7 530 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 USP17L20D6RJB6 530 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 FLOT1O75955 427 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 KRT2P35908 639 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 USP17L24Q0WX57 530 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 CST9Q5W186 159 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 FASTKD5Q7L8L6 764 aaKnown RBP14.16□□□□□ -0.14
TUBE1-202ENST00000368662 BICD2Q8TD16 824 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 ZMYND12Q9H0C1 365 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 GLT8D2Q9H1C3 349 aa14.16□□□□□ -0.14
TUBE1-202ENST00000368662 C6orf50Q9HD87 102 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms