RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 DNAJC18Q9H819 358 aa28.35■■■□□ 2.13
CLK2-203ENST00000368361 SLFN14P0C7P3 912 aa28.34■■■□□ 2.13
CLK2-203ENST00000368361 SNHG28P0DPA3 235 aa28.34■■■□□ 2.13
CLK2-203ENST00000368361 LMOD1P29536 600 aaPredicted RBP28.34■■■□□ 2.13
CLK2-203ENST00000368361 SIPA1L1O43166 1804 aa28.34■■■□□ 2.13
CLK2-203ENST00000368361 MPHOSPH10O00566 681 aaKnown RBP28.34■■■□□ 2.13
CLK2-203ENST00000368361 C21orf2O43822 256 aa28.34■■■□□ 2.13
CLK2-203ENST00000368361 MYL5Q02045 173 aa28.34■■■□□ 2.13
CLK2-203ENST00000368361 SPATA20Q8TB22 786 aa28.34■■■□□ 2.13
CLK2-203ENST00000368361 CCDC12Q8WUD4 166 aaPredicted RBP28.34■■■□□ 2.13
CLK2-203ENST00000368361 FAM198AQ9UFP1 575 aa28.34■■■□□ 2.13
CLK2-203ENST00000368361 GREB1LQ9C091 1923 aaPredicted RBP28.33■■■□□ 2.13
CLK2-203ENST00000368361 ASPRV1Q53RT3 343 aa28.33■■■□□ 2.13
CLK2-203ENST00000368361 ARL6IP4Q66PJ3 421 aaKnown RBP28.33■■■□□ 2.13
CLK2-203ENST00000368361 SMCO2A6NFE2 343 aa28.33■■■□□ 2.12
CLK2-203ENST00000368361 DDTLA6NHG4 134 aaPredicted RBP28.33■■■□□ 2.12
CLK2-203ENST00000368361 AFMP43652 599 aa28.33■■■□□ 2.12
CLK2-203ENST00000368361 MORC3Q14149 939 aa28.33■■■□□ 2.12
CLK2-203ENST00000368361 IDI2Q9BXS1 227 aa28.33■■■□□ 2.12
CLK2-203ENST00000368361 SERPINA10Q9UK55 444 aa28.33■■■□□ 2.12
CLK2-203ENST00000368361 SH3RF1Q7Z6J0 888 aa28.32■■■□□ 2.12
CLK2-203ENST00000368361 PAGE5Q96GU1 130 aa28.32■■■□□ 2.12
CLK2-203ENST00000368361 XPO4Q9C0E2 1151 aaKnown RBP28.32■■■□□ 2.12
CLK2-203ENST00000368361 IFNKQ9P0W0 207 aa28.32■■■□□ 2.12
CLK2-203ENST00000368361 FAM196BA6NMK8 535 aa28.31■■■□□ 2.12
CLK2-203ENST00000368361 ATP1A3P13637 1013 aa28.31■■■□□ 2.12
CLK2-203ENST00000368361 CC2D2BQ6DHV5 1058 aa28.31■■■□□ 2.12
CLK2-203ENST00000368361 CACTINQ8WUQ7 758 aaKnown RBP28.31■■■□□ 2.12
CLK2-203ENST00000368361 CCDC34Q96HJ3 373 aa28.31■■■□□ 2.12
CLK2-203ENST00000368361 DHX36Q9H2U1 1008 aaKnown RBP28.31■■■□□ 2.12
CLK2-203ENST00000368361 C6orf50Q9HD87 102 aa28.31■■■□□ 2.12
CLK2-203ENST00000368361 C10orf71Q711Q0 1435 aa28.31■■■□□ 2.12
CLK2-203ENST00000368361 YDJCA8MPS7 323 aa28.31■■■□□ 2.12
CLK2-203ENST00000368361 PPIP5K2O43314 1243 aa28.31■■■□□ 2.12
CLK2-203ENST00000368361 SMC2O95347 1197 aa28.31■■■□□ 2.12
CLK2-203ENST00000368361 MYH4Q9Y623 1939 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 GNA11P29992 359 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 TRIML1Q8N9V2 468 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 SUPT20HQ8NEM7 779 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 GPCPD1Q9NPB8 672 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 SPTLC3Q9NUV7 552 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 CASP1P29466 404 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 E2F4Q16254 413 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 SH3BP5LQ7L8J4 393 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 FILIP1Q7Z7B0 1213 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 TMEM60Q9H2L4 133 aa28.3■■■□□ 2.12
CLK2-203ENST00000368361 ATP2B2Q01814 1243 aa28.29■■■□□ 2.12
CLK2-203ENST00000368361 SOGA3Q5TF21 947 aa28.29■■■□□ 2.12
CLK2-203ENST00000368361 ZSCAN29Q8IWY8 852 aaPredicted RBP28.29■■■□□ 2.12
CLK2-203ENST00000368361 LONP1P36776 959 aaKnown RBP28.28■■■□□ 2.12
CLK2-203ENST00000368361 ZNF543Q08ER8 600 aa28.28■■■□□ 2.12
CLK2-203ENST00000368361 ARID5BQ14865 1188 aa28.28■■■□□ 2.12
CLK2-203ENST00000368361 MLKLQ8NB16 471 aa28.28■■■□□ 2.12
CLK2-203ENST00000368361 CCDC17Q96LX7 622 aa28.28■■■□□ 2.12
CLK2-203ENST00000368361 PI4KBQ9UBF8 816 aa28.28■■■□□ 2.12
CLK2-203ENST00000368361 FANCCQ00597 558 aa28.28■■■□□ 2.12
CLK2-203ENST00000368361 DEFB132Q7Z7B7 95 aa28.28■■■□□ 2.12
CLK2-203ENST00000368361 CDC25AP30304 524 aa28.27■■■□□ 2.12
CLK2-203ENST00000368361 SHROOM1Q2M3G4 852 aaPredicted RBP28.27■■■□□ 2.12
CLK2-203ENST00000368361 KRT25Q7Z3Z0 450 aa28.27■■■□□ 2.12
CLK2-203ENST00000368361 LRRC8AQ8IWT6 810 aa28.27■■■□□ 2.12
CLK2-203ENST00000368361 IQUBQ8NA54 791 aa28.27■■■□□ 2.12
CLK2-203ENST00000368361 TDRD3Q9H7E2 651 aaKnown RBP28.27■■■□□ 2.12
CLK2-203ENST00000368361 FANCLQ9NW38 375 aa28.27■■■□□ 2.12
CLK2-203ENST00000368361 DPYDQ12882 1025 aa28.27■■■□□ 2.12
CLK2-203ENST00000368361 STAMQ92783 540 aa28.27■■■□□ 2.12
CLK2-203ENST00000368361 COA7Q96BR5 231 aa28.27■■■□□ 2.12
CLK2-203ENST00000368361 R3HCC1Q9Y3T6 440 aaKnown RBP28.27■■■□□ 2.12
CLK2-203ENST00000368361 FMR1Q06787 632 aaKnown RBP eCLIP28.26■■■□□ 2.11
CLK2-203ENST00000368361 NONOQ15233 471 aaKnown RBP eCLIP28.26■■■□□ 2.11
CLK2-203ENST00000368361 DTHD1Q6ZMT9 781 aa28.26■■■□□ 2.11
CLK2-203ENST00000368361 DACH1Q9UI36 760 aa28.26■■■□□ 2.11
CLK2-203ENST00000368361 hCG_1984214I3L0E3 225 aa28.26■■■□□ 2.11
CLK2-203ENST00000368361 TTBK2Q6IQ55 1244 aa28.26■■■□□ 2.11
CLK2-203ENST00000368361 PDXDC2PQ6P474 469 aa28.26■■■□□ 2.11
CLK2-203ENST00000368361 ZNF713Q8N859 430 aaPredicted RBP28.26■■■□□ 2.11
CLK2-203ENST00000368361 ESYT2A0FGR8 921 aa28.25■■■□□ 2.11
CLK2-203ENST00000368361 NPM3O75607 178 aaKnown RBP28.25■■■□□ 2.11
CLK2-203ENST00000368361 CFAP100Q494V2 611 aa28.25■■■□□ 2.11
CLK2-203ENST00000368361 CERKLQ49MI3 558 aaPredicted RBP28.25■■■□□ 2.11
CLK2-203ENST00000368361 ADGRF4Q8IZF3 695 aa28.25■■■□□ 2.11
CLK2-203ENST00000368361 TTLL6Q8N841 843 aa28.25■■■□□ 2.11
CLK2-203ENST00000368361 JMJD4Q9H9V9 463 aa28.25■■■□□ 2.11
CLK2-203ENST00000368361 BIN2Q9UBW5 565 aaPredicted RBP28.25■■■□□ 2.11
CLK2-203ENST00000368361 LETM2Q2VYF4 491 aa28.24■■■□□ 2.11
CLK2-203ENST00000368361 REXO1Q8N1G1 1221 aaKnown RBP28.24■■■□□ 2.11
CLK2-203ENST00000368361 DNTTIP2Q5QJE6 756 aaKnown RBP28.24■■■□□ 2.11
CLK2-203ENST00000368361 KCTD1Q719H9 257 aa28.24■■■□□ 2.11
CLK2-203ENST00000368361 PRMT6Q96LA8 375 aaPredicted RBP28.24■■■□□ 2.11
CLK2-203ENST00000368361 PYM1Q9BRP8 204 aaKnown RBP28.24■■■□□ 2.11
CLK2-203ENST00000368361 CCNT1O60563 726 aaKnown RBP28.23■■■□□ 2.11
CLK2-203ENST00000368361 CCDC96Q2M329 555 aa28.23■■■□□ 2.11
CLK2-203ENST00000368361 JAKMIP3Q5VZ66 844 aa28.23■■■□□ 2.11
CLK2-203ENST00000368361 TRMT44Q8IYL2 757 aaKnown RBP28.23■■■□□ 2.11
CLK2-203ENST00000368361 GSDMAQ96QA5 445 aa28.23■■■□□ 2.11
CLK2-203ENST00000368361 MTRQ99707 1265 aa28.23■■■□□ 2.11
CLK2-203ENST00000368361 TMEM260Q9NX78 707 aa28.23■■■□□ 2.11
CLK2-203ENST00000368361 LAD1O00515 517 aa28.23■■■□□ 2.11
CLK2-203ENST00000368361 SLC16A2P36021 539 aa28.23■■■□□ 2.11
CLK2-203ENST00000368361 TXLNAP40222 546 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms