RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PPP2R5BQ15173 497 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 GPR161Q8N6U8 529 aaKnown RBP14.26□□□□□ -0.13
PTPRK-207ENST00000368226 DYNLL2Q96FJ2 89 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 NT5C3AQ9H0P0 336 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 PFDN4Q9NQP4 134 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 CCDC160A6NGH7 325 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 KCNJ18B7U540 433 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 BUB1O43683 1085 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 KCNJ12Q14500 433 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 ADAT2Q7Z6V5 191 aaKnown RBP14.26□□□□□ -0.13
PTPRK-207ENST00000368226 DESI2Q9BSY9 194 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 UBN2Q6ZU65 1347 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 OR52Z1P0C646 297 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 MORC3Q14149 939 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 CCDC105Q8IYK2 499 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 STK24Q9Y6E0 443 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 NLRP1Q9C000 1473 aa14.26□□□□□ -0.13
PTPRK-207ENST00000368226 FAM76AQ8TAV0 307 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 CCT6BQ92526 530 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 ADGBQ8N7X0 1667 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 FMNL3Q8IVF7 1028 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 LCORLQ8N3X6 602 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 SYMPKQ92797 1274 aaKnown RBP14.25□□□□□ -0.13
PTPRK-207ENST00000368226 ZNF274Q96GC6 653 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-207ENST00000368226 NUP58Q9BVL2 599 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 TEKT3Q9BXF9 490 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 CSRNP2Q9H175 543 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 TMEM63CQ9P1W3 806 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 MAGI2Q86UL8 1455 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 POLGP54098 1239 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-207ENST00000368226 DIXDC1Q155Q3 683 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 MYOCDQ8IZQ8 938 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 HINFPQ9BQA5 517 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 KDM3AQ9Y4C1 1321 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 PEX26Q7Z412 305 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 NKIRAS1Q9NYS0 192 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 SAMD15Q9P1V8 674 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 SEPT9Q9UHD8 586 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-207ENST00000368226 MYO5CQ9NQX4 1742 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 PDIA3P30101 505 aaKnown RBP14.25□□□□□ -0.13
PTPRK-207ENST00000368226 ITIH3Q06033 890 aa14.25□□□□□ -0.13
PTPRK-207ENST00000368226 NAP1L3Q99457 506 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-207ENST00000368226 STK10O94804 968 aaKnown RBP14.24□□□□□ -0.13
PTPRK-207ENST00000368226 XRCC5P13010 732 aaKnown RBP14.24□□□□□ -0.13
PTPRK-207ENST00000368226 KIF22Q14807 665 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 NBPF11Q86T75 865 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPRK-207ENST00000368226 PFKFB2O60825 505 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 PTGDRQ13258 359 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 ELF2Q15723 593 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 HDXQ7Z353 690 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 RIOK1Q9BRS2 568 aaKnown RBP14.24□□□□□ -0.13
PTPRK-207ENST00000368226 LPXNO60711 386 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 USP17L8P0C7I0 530 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 DPP9Q86TI2 863 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 PIGBQ92521 554 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 GJA10Q969M2 543 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 IFIH1Q9BYX4 1025 aaKnown RBP14.24□□□□□ -0.13
PTPRK-207ENST00000368226 CAPN12Q6ZSI9 719 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.24□□□□□ -0.13
PTPRK-207ENST00000368226 RIOK3O14730 519 aaKnown RBP14.24□□□□□ -0.13
PTPRK-207ENST00000368226 MAN1A1P33908 653 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 NDUFA8P51970 172 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 ZSWIM6Q9HCJ5 1215 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 SEPT10Q9P0V9 454 aa14.24□□□□□ -0.13
PTPRK-207ENST00000368226 NEO1Q92859 1461 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 A0A087WWV3 80 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 IL6STP40189 918 aaPredicted RBP14.23□□□□□ -0.13
PTPRK-207ENST00000368226 ZBTB8OSQ8IWT0 167 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 FAM178BQ8IXR5 827 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 SLC5A4Q9NY91 659 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 TPD52P55327 224 aaPredicted RBP14.23□□□□□ -0.13
PTPRK-207ENST00000368226 CLUL1Q15846 466 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 CEP57Q86XR8 500 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 PUS7LQ9H0K6 701 aaKnown RBP14.23□□□□□ -0.13
PTPRK-207ENST00000368226 KIAA1024Q9UPX6 916 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 VPS41P49754 854 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 SEPT12Q8IYM1 358 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 ARAP3Q8WWN8 1544 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 PLEKHG1Q9ULL1 1385 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 COA7Q96BR5 231 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 MEIS1O00470 390 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 CACNB3P54284 484 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 ADALQ6DHV7 355 aa14.23□□□□□ -0.13
PTPRK-207ENST00000368226 WDR17Q8IZU2 1322 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 ACTN4O43707 911 aaKnown RBP14.22□□□□□ -0.13
PTPRK-207ENST00000368226 TBC1D8O95759 1140 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 TUBB4AP04350 444 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 RPS6KA1Q15418 735 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 LONRF2Q1L5Z9 754 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 ARMCX5Q6P1M9 558 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 CCDC89Q8N998 374 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 LSG1Q9H089 658 aaKnown RBP14.22□□□□□ -0.13
PTPRK-207ENST00000368226 PCDHA7Q9UN72 937 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 GCC2Q8IWJ2 1684 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 SOS2Q07890 1332 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-207ENST00000368226 PRR36Q9H6K5 1346 aa14.22□□□□□ -0.13
PTPRK-207ENST00000368226 POLR2FP61218 127 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms