RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C6orf222P0C671 652 aaPredicted RBP17.9■□□□□ 0.46
VAMP4-202ENST00000367740 NHLH1Q02575 133 aa17.9■□□□□ 0.46
VAMP4-202ENST00000367740 KCTD2Q14681 263 aa17.9■□□□□ 0.46
VAMP4-202ENST00000367740 TTC6Q86TZ1 520 aa17.9■□□□□ 0.46
VAMP4-202ENST00000367740 RIOX2Q8IUF8 465 aa17.9■□□□□ 0.46
VAMP4-202ENST00000367740 MIGA1Q8NAN2 632 aa17.9■□□□□ 0.46
VAMP4-202ENST00000367740 HLA-CQ95604 372 aa17.9■□□□□ 0.46
VAMP4-202ENST00000367740 HIPK3Q9H422 1215 aa17.9■□□□□ 0.46
VAMP4-202ENST00000367740 PIH1D3Q9NQM4 214 aaKnown RBP17.9■□□□□ 0.46
VAMP4-202ENST00000367740 HDAC5Q9UQL6 1122 aa17.9■□□□□ 0.46
VAMP4-202ENST00000367740 SLC4A7Q9Y6M7 1214 aa17.9■□□□□ 0.46
VAMP4-202ENST00000367740 SNAI1O95863 264 aaPredicted RBP17.89■□□□□ 0.45
VAMP4-202ENST00000367740 CYP7A1P22680 504 aa17.89■□□□□ 0.45
VAMP4-202ENST00000367740 GABPAQ06546 454 aa17.89■□□□□ 0.45
VAMP4-202ENST00000367740 MTX1Q13505 466 aa17.89■□□□□ 0.45
VAMP4-202ENST00000367740 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
VAMP4-202ENST00000367740 SPICE1Q8N0Z3 855 aa17.89■□□□□ 0.45
VAMP4-202ENST00000367740 PCSK9Q8NBP7 692 aaKnown RBP17.89■□□□□ 0.45
VAMP4-202ENST00000367740 VTI1AQ96AJ9 217 aa17.89■□□□□ 0.45
VAMP4-202ENST00000367740 CERS4Q9HA82 394 aa17.89■□□□□ 0.45
VAMP4-202ENST00000367740 ZHX1Q9UKY1 873 aaPredicted RBP17.89■□□□□ 0.45
VAMP4-202ENST00000367740 MPHOSPH10O00566 681 aaKnown RBP17.88■□□□□ 0.45
VAMP4-202ENST00000367740 CA3P07451 260 aa17.88■□□□□ 0.45
VAMP4-202ENST00000367740 EVX2Q03828 476 aa17.88■□□□□ 0.45
VAMP4-202ENST00000367740 TTC39AQ5SRH9 613 aa17.88■□□□□ 0.45
VAMP4-202ENST00000367740 VWCEQ96DN2 955 aa17.88■□□□□ 0.45
VAMP4-202ENST00000367740 UPF3AQ9H1J1 476 aaKnown RBP17.88■□□□□ 0.45
VAMP4-202ENST00000367740 WNT8AQ9H1J5 351 aa17.88■□□□□ 0.45
VAMP4-202ENST00000367740 MRS2Q9HD23 443 aa17.88■□□□□ 0.45
VAMP4-202ENST00000367740 ADAMTS5Q9UNA0 930 aa17.88■□□□□ 0.45
VAMP4-202ENST00000367740 IGSF3O75054 1194 aa17.87■□□□□ 0.45
VAMP4-202ENST00000367740 ATP2A2P16615 1042 aaKnown RBP17.87■□□□□ 0.45
VAMP4-202ENST00000367740 ZAP70P43403 619 aa17.87■□□□□ 0.45
VAMP4-202ENST00000367740 CCL23P55773 120 aa17.87■□□□□ 0.45
VAMP4-202ENST00000367740 GJA9P57773 515 aa17.87■□□□□ 0.45
VAMP4-202ENST00000367740 CLEC10AQ8IUN9 316 aa17.87■□□□□ 0.45
VAMP4-202ENST00000367740 MSL3Q8N5Y2 521 aaKnown RBP17.87■□□□□ 0.45
VAMP4-202ENST00000367740 SCN5AQ14524 2016 aa17.87■□□□□ 0.45
VAMP4-202ENST00000367740 ZBBXA8MT70 800 aa17.86■□□□□ 0.45
VAMP4-202ENST00000367740 CTAGE5O15320 804 aa17.86■□□□□ 0.45
VAMP4-202ENST00000367740 MAMDC4Q6UXC1 1216 aa17.86■□□□□ 0.45
VAMP4-202ENST00000367740 CERS3Q8IU89 383 aa17.86■□□□□ 0.45
VAMP4-202ENST00000367740 SLC43A3Q8NBI5 491 aa17.86■□□□□ 0.45
VAMP4-202ENST00000367740 NOC4LQ9BVI4 516 aaKnown RBP17.86■□□□□ 0.45
VAMP4-202ENST00000367740 ZNF214Q9UL59 606 aaPredicted RBP17.86■□□□□ 0.45
VAMP4-202ENST00000367740 WDR46O15213 610 aaKnown RBP17.85■□□□□ 0.45
VAMP4-202ENST00000367740 ARHGEF15O94989 841 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 PTPRSQ13332 1948 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 ALDH1L2Q3SY69 923 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 TMEM67Q5HYA8 995 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 GNASQ5JWF2 1037 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 CFAP54Q96N23 3096 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 DBNDD2Q9BQY9 259 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 VCPKMTQ9H867 229 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 SMC4Q9NTJ3 1288 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 FBXO28Q9NVF7 368 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 TMX2Q9Y320 296 aa17.85■□□□□ 0.45
VAMP4-202ENST00000367740 STAT3P40763 770 aa17.84■□□□□ 0.45
VAMP4-202ENST00000367740 REPS2Q8NFH8 660 aa17.84■□□□□ 0.45
VAMP4-202ENST00000367740 SPC25Q9HBM1 224 aa17.84■□□□□ 0.45
VAMP4-202ENST00000367740 ZNF318Q5VUA4 2279 aa17.84■□□□□ 0.45
VAMP4-202ENST00000367740 TRIOO75962 3097 aa17.84■□□□□ 0.45
VAMP4-202ENST00000367740 DNAJC25-GNG10A0A024R161 153 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 VWA5AO00534 786 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 ACVR2BQ13705 512 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 TTLL4Q14679 1199 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 CCDC144BQ3MJ40 725 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 CCDC158Q5M9N0 1113 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 TMEM179Q6ZVK1 233 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 ARNTL2Q8WYA1 636 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 FBXL18Q96ME1 805 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 UIMC1Q96RL1 719 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 TANC1Q9C0D5 1861 aa17.83■□□□□ 0.44
VAMP4-202ENST00000367740 IDH1O75874 414 aaKnown RBP17.82■□□□□ 0.44
VAMP4-202ENST00000367740 COPB2P35606 906 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 NKX3-2P78367 333 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 TAP1Q03518 808 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 ICA1Q05084 483 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 GRB10Q13322 594 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 TNNI3KQ59H18 835 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 RPUSD2Q8IZ73 545 aaKnown RBP17.82■□□□□ 0.44
VAMP4-202ENST00000367740 MAGEB6Q8N7X4 407 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 SCLYQ96I15 445 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 ZNF512BQ96KM6 892 aaPredicted RBP17.82■□□□□ 0.44
VAMP4-202ENST00000367740 ARHGEF10LQ9HCE6 1279 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.82■□□□□ 0.44
VAMP4-202ENST00000367740 FPGT-TNNI3KV9GXZ4 949 aa17.82■□□□□ 0.44
VAMP4-202ENST00000367740 GRIN2DO15399 1336 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 B4GALT4O60513 344 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 LPXNO60711 386 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 POLR3DP05423 398 aaPredicted RBP17.81■□□□□ 0.44
VAMP4-202ENST00000367740 BEX3Q00994 111 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 G3BP1Q13283 466 aaKnown RBP eCLIP17.81■□□□□ 0.44
VAMP4-202ENST00000367740 CXCL17Q6UXB2 119 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 ZNF467Q7Z7K2 595 aaPredicted RBP17.81■□□□□ 0.44
VAMP4-202ENST00000367740 GJD3Q8N144 294 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 FGD4Q96M96 766 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 AGBL1Q96MI9 1066 aa17.81■□□□□ 0.44
VAMP4-202ENST00000367740 RIOK1Q9BRS2 568 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms