RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 COG2Q14746 738 aa17.3■□□□□ 0.36
SF3B5-201ENST00000367569 SLFN13Q68D06 897 aa17.3■□□□□ 0.36
SF3B5-201ENST00000367569 ESYT1Q9BSJ8 1104 aa17.3■□□□□ 0.36
SF3B5-201ENST00000367569 C11orf49Q9H6J7 331 aa17.3■□□□□ 0.36
SF3B5-201ENST00000367569 FLRT1Q9NZU1 646 aa17.3■□□□□ 0.36
SF3B5-201ENST00000367569 PLXNA1Q9UIW2 1896 aa17.29■□□□□ 0.36
SF3B5-201ENST00000367569 ZNF236Q9UL36 1845 aa17.29■□□□□ 0.36
SF3B5-201ENST00000367569 SLC15A5A6NIM6 579 aa17.29■□□□□ 0.36
SF3B5-201ENST00000367569 SLC4A3P48751 1232 aa17.29■□□□□ 0.36
SF3B5-201ENST00000367569 CCDC96Q2M329 555 aa17.29■□□□□ 0.36
SF3B5-201ENST00000367569 LHX8Q68G74 356 aa17.29■□□□□ 0.36
SF3B5-201ENST00000367569 KCTD1Q719H9 257 aa17.29■□□□□ 0.36
SF3B5-201ENST00000367569 C7orf61Q8IZ16 206 aa17.29■□□□□ 0.36
SF3B5-201ENST00000367569 KIFC2Q96AC6 838 aa17.29■□□□□ 0.36
SF3B5-201ENST00000367569 RNF41Q9H4P4 317 aaPredicted RBP17.29■□□□□ 0.36
SF3B5-201ENST00000367569 RBM8AQ9Y5S9 174 aaKnown RBP17.29■□□□□ 0.36
SF3B5-201ENST00000367569 PFASO15067 1338 aa17.28■□□□□ 0.36
SF3B5-201ENST00000367569 FRMPD2Q68DX3 1309 aaPredicted RBP17.28■□□□□ 0.36
SF3B5-201ENST00000367569 CYP21A2P08686 494 aa17.28■□□□□ 0.36
SF3B5-201ENST00000367569 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
SF3B5-201ENST00000367569 MCCP23508 829 aa17.28■□□□□ 0.36
SF3B5-201ENST00000367569 SNAP25P60880 206 aa17.28■□□□□ 0.36
SF3B5-201ENST00000367569 IKQ13123 557 aaPredicted RBP17.28■□□□□ 0.36
SF3B5-201ENST00000367569 STOX1Q6ZVD7 989 aa17.28■□□□□ 0.36
SF3B5-201ENST00000367569 SLF1Q9BQI6 1058 aa17.28■□□□□ 0.36
SF3B5-201ENST00000367569 MOV10L1Q9BXT6 1211 aaKnown RBP17.28■□□□□ 0.36
SF3B5-201ENST00000367569 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
SF3B5-201ENST00000367569 CTNNA3Q9UI47 895 aa17.28■□□□□ 0.36
SF3B5-201ENST00000367569 PPP1R9AQ9ULJ8 1098 aa17.28■□□□□ 0.36
SF3B5-201ENST00000367569 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
SF3B5-201ENST00000367569 ZNFX1Q9P2E3 1918 aaKnown RBP17.27■□□□□ 0.36
SF3B5-201ENST00000367569 CDC45O75419 566 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 HOXC6P09630 235 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 GRB14Q14449 540 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 TMEM132BQ14DG7 1078 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 GMCL1P1Q8NEA9 526 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 NPLOC4Q8TAT6 608 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 ESR2Q92731 530 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 MKL1Q969V6 931 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 TMEM47Q9BQJ4 181 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 LSG1Q9H089 658 aaKnown RBP17.27■□□□□ 0.36
SF3B5-201ENST00000367569 SPATC1LQ9H0A9 340 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 HOXC10Q9NYD6 342 aa17.27■□□□□ 0.36
SF3B5-201ENST00000367569 FRMPD3Q5JV73 1810 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 TMEM232C9JQI7 657 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 COL6A1P12109 1028 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 BMP3P12645 472 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 SLC1A4P43007 532 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 MFSD14CQ5VZR4 134 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 RCSD1Q6JBY9 416 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 CYB5R4Q7L1T6 521 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 NCAPG2Q86XI2 1143 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 GDF15Q99988 308 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 IVNS1ABPQ9Y6Y0 642 aa17.26■□□□□ 0.35
SF3B5-201ENST00000367569 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
SF3B5-201ENST00000367569 A0A1W2PPC1 479 aa17.25■□□□□ 0.35
SF3B5-201ENST00000367569 VWA5AO00534 786 aa17.25■□□□□ 0.35
SF3B5-201ENST00000367569 SYN1P17600 705 aa17.25■□□□□ 0.35
SF3B5-201ENST00000367569 ERCC3P19447 782 aa17.25■□□□□ 0.35
SF3B5-201ENST00000367569 CYP2C19P33261 490 aa17.25■□□□□ 0.35
SF3B5-201ENST00000367569 COL9A3Q14050 684 aaPredicted RBP17.25■□□□□ 0.35
SF3B5-201ENST00000367569 CHST3Q7LGC8 479 aa17.25■□□□□ 0.35
SF3B5-201ENST00000367569 CPXCR1Q8N123 301 aa17.25■□□□□ 0.35
SF3B5-201ENST00000367569 GPCPD1Q9NPB8 672 aa17.25■□□□□ 0.35
SF3B5-201ENST00000367569 SMCHD1A6NHR9 2005 aa17.25■□□□□ 0.35
SF3B5-201ENST00000367569 TNKSO95271 1327 aa17.24■□□□□ 0.35
SF3B5-201ENST00000367569 MYH6P13533 1939 aa17.24■□□□□ 0.35
SF3B5-201ENST00000367569 SOX1O00570 391 aaPredicted RBP17.24■□□□□ 0.35
SF3B5-201ENST00000367569 IGHA2P01877 340 aa17.24■□□□□ 0.35
SF3B5-201ENST00000367569 TOP1P11387 765 aaKnown RBP17.24■□□□□ 0.35
SF3B5-201ENST00000367569 SLC16A2P36021 539 aa17.24■□□□□ 0.35
SF3B5-201ENST00000367569 TTBK2Q6IQ55 1244 aa17.24■□□□□ 0.35
SF3B5-201ENST00000367569 KIAA1211Q6ZU35 1233 aa17.24■□□□□ 0.35
SF3B5-201ENST00000367569 TRPV1Q8NER1 839 aa17.24■□□□□ 0.35
SF3B5-201ENST00000367569 REPS2Q8NFH8 660 aa17.24■□□□□ 0.35
SF3B5-201ENST00000367569 RAVER2Q9HCJ3 691 aaKnown RBP17.24■□□□□ 0.35
SF3B5-201ENST00000367569 ZSWIM5Q9P217 1185 aa17.24■□□□□ 0.35
SF3B5-201ENST00000367569 E7EWF7 191 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 PCP11498 1178 aaKnown RBP17.23■□□□□ 0.35
SF3B5-201ENST00000367569 ADORA2AP29274 412 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 BMP8BP34820 402 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 SNRNP48Q6IEG0 339 aaKnown RBP17.23■□□□□ 0.35
SF3B5-201ENST00000367569 CCDC174Q6PII3 467 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 MB21D1Q8N884 522 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 ENAHQ8N8S7 591 aaPredicted RBP17.23■□□□□ 0.35
SF3B5-201ENST00000367569 SHCBP1Q8NEM2 672 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 MAP4K1Q92918 833 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 GMCL1Q96IK5 515 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 CPVLQ9H3G5 476 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 HOMER2Q9NSB8 354 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
SF3B5-201ENST00000367569 ZNF214Q9UL59 606 aaPredicted RBP17.23■□□□□ 0.35
SF3B5-201ENST00000367569 CTDP1Q9Y5B0 961 aaPredicted RBP17.23■□□□□ 0.35
SF3B5-201ENST00000367569 LCTP09848 1927 aa17.23■□□□□ 0.35
SF3B5-201ENST00000367569 STRNO43815 780 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 COBLO75128 1261 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 GOLGA8HP0CJ92 632 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 CNGA1P29973 690 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 NOVP48745 357 aa17.22■□□□□ 0.35
SF3B5-201ENST00000367569 STAT2P52630 851 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms