RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 ANKS1AQ92625 1134 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 USP26Q9BXU7 913 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 RBPJLQ9UBG7 517 aa11.59□□□□□ -0.55
NUP43-202ENST00000367402 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
NUP43-202ENST00000367402 TMEM232C9JQI7 657 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 EPB41L2O43491 1005 aaKnown RBP11.58□□□□□ -0.56
NUP43-202ENST00000367402 PRC1O43663 620 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 EIF5BO60841 1220 aaKnown RBP11.58□□□□□ -0.56
NUP43-202ENST00000367402 FMNL1O95466 1100 aaPredicted RBP11.58□□□□□ -0.56
NUP43-202ENST00000367402 PSMC4P43686 418 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 IKQ13123 557 aaPredicted RBP11.58□□□□□ -0.56
NUP43-202ENST00000367402 WTAPQ15007 396 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 FAM110CQ1W6H9 321 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 CCDC96Q2M329 555 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 TMEM67Q5HYA8 995 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 COL13A1Q5TAT6 717 aaPredicted RBP11.58□□□□□ -0.56
NUP43-202ENST00000367402 KCTD1Q719H9 257 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 CCAR1Q8IX12 1150 aaKnown RBP11.58□□□□□ -0.56
NUP43-202ENST00000367402 PNMA1Q8ND90 353 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 DCAF4Q8WV16 495 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 ATG4CQ96DT6 458 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 GMCL1Q96IK5 515 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 NEK1Q96PY6 1258 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 SLF1Q9BQI6 1058 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 ARHGAP39Q9C0H5 1083 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 TXNRD2Q9NNW7 524 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 FBXO28Q9NVF7 368 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 FEM1BQ9UK73 627 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 RABGAP1Q9Y3P9 1069 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 MYH8P13535 1937 aa11.58□□□□□ -0.56
NUP43-202ENST00000367402 LOC285556D6RIA3 1793 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 FCGRTP55899 365 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 ANTXR2P58335 489 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 ERVK-9P63128 1117 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 ERVK-24P63145 666 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 PLS1Q14651 629 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 SEC23AQ15436 765 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 Q3C1V9 767 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 ADCK5Q3MIX3 580 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 LBX2Q6XYB7 198 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 RASGRP2Q7LDG7 609 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 CTU1Q7Z7A3 348 aaKnown RBP11.57□□□□□ -0.56
NUP43-202ENST00000367402 PRPF38AQ8NAV1 312 aaKnown RBP11.57□□□□□ -0.56
NUP43-202ENST00000367402 CHURC1Q8WUH1 139 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 KIFC2Q96AC6 838 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 EFCC1Q9HA90 598 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 GPCPD1Q9NPB8 672 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 BTBD7Q9P203 1132 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 MORF4L1Q9UBU8 362 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 PPP1R9AQ9ULJ8 1098 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 TRIM17Q9Y577 477 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 CTDP1Q9Y5B0 961 aaPredicted RBP11.57□□□□□ -0.56
NUP43-202ENST00000367402 SNX14Q9Y5W7 946 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 FRMPD2Q68DX3 1309 aaPredicted RBP11.57□□□□□ -0.56
NUP43-202ENST00000367402 MYPNQ86TC9 1320 aa11.57□□□□□ -0.56
NUP43-202ENST00000367402 GREB1LQ9C091 1923 aaPredicted RBP11.56□□□□□ -0.56
NUP43-202ENST00000367402 VWA5AO00534 786 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 TNPO2O14787 897 aaKnown RBP11.56□□□□□ -0.56
NUP43-202ENST00000367402 ZBED4O75132 1171 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 CNMDO75829 334 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
NUP43-202ENST00000367402 PDHBP11177 359 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 STAT2P52630 851 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 CCNA1P78396 465 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 DHX32Q7L7V1 743 aaKnown RBP11.56□□□□□ -0.56
NUP43-202ENST00000367402 FAM160B2Q86V87 743 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 MB21D1Q8N884 522 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 IGDCC4Q8TDY8 1250 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 KCNB2Q92953 911 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 TMEM87BQ96K49 555 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 JAKMIP1Q96N16 626 aaKnown RBP11.56□□□□□ -0.56
NUP43-202ENST00000367402 LRRC2Q9BYS8 371 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 SENP2Q9HC62 589 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 CWC22Q9HCG8 908 aaKnown RBP11.56□□□□□ -0.56
NUP43-202ENST00000367402 LAMA4Q16363 1823 aa11.56□□□□□ -0.56
NUP43-202ENST00000367402 PTPRFP10586 1907 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 GOLGA8HP0CJ92 632 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 PSMA5P28066 241 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 HOXD10P28358 340 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 CTGFP29279 349 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 SLC16A2P36021 539 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 SLC4A3P48751 1232 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 FGD1P98174 961 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 CAP1Q01518 475 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 ZNF543Q08ER8 600 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 COL9A3Q14050 684 aaPredicted RBP11.55□□□□□ -0.56
NUP43-202ENST00000367402 WDR78Q5VTH9 848 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 TTBK2Q6IQ55 1244 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 OTOP1Q7RTM1 612 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 TMTC2Q8N394 836 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 COA7Q96BR5 231 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 TRIM47Q96LD4 638 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 MTA3Q9BTC8 594 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 GPHNQ9NQX3 736 aaPredicted RBP11.55□□□□□ -0.56
NUP43-202ENST00000367402 ADAMTS5Q9UNA0 930 aa11.55□□□□□ -0.56
NUP43-202ENST00000367402 CCDC69A6NI79 296 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms