RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZSCAN10Q96SZ4 725 aaPredicted RBP17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 GARSP41250 739 aaKnown RBP17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 TYW1BQ6NUM6 668 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 FAM227BQ96M60 508 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 DSCC1Q9BVC3 393 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 ICA1Q05084 483 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 NXNQ6DKJ4 435 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 TSTA3Q13630 321 aaPredicted RBP17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 FAM8A1Q9UBU6 413 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 TPCN1Q9ULQ1 816 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 LONRF3Q496Y0 759 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 IFIH1Q9BYX4 1025 aaKnown RBP17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 SYCP2Q9BX26 1530 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 KIF9Q9HAQ2 790 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 KRT10P13645 584 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 BAG5Q9UL15 447 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 NUB1Q9Y5A7 615 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 LMNB1P20700 586 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 CDC37L1Q7L3B6 337 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 FAM207AQ9NSI2 230 aaPredicted RBP17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 NFE2L3Q9Y4A8 694 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 PARD3BQ8TEW8 1205 aa17.25■□□□□ 0.35
NUCKS1-201ENST00000367142 A6NJR5 290 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 BUB1BO60566 1050 aaPredicted RBP17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 PLA2G4DQ86XP0 818 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 CCPG1Q9ULG6 757 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 KDM2BQ8NHM5 1336 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 BLIDQ8IZY5 108 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 ELMSAN1Q6PJG2 1045 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 TTLL7Q6ZT98 887 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 POTEDQ86YR6 584 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 PRAG1Q86YV5 1406 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 PANK4Q9NVE7 773 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 TXNDC9O14530 226 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 IFNB1P01574 187 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 RFC1P35251 1148 aaPredicted RBP17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 SLC17A8Q8NDX2 589 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 DDX25Q9UHL0 483 aaKnown RBP17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 RNF40O75150 1001 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 PIK3CAP42336 1068 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 NLRC4Q9NPP4 1024 aa17.24■□□□□ 0.35
NUCKS1-201ENST00000367142 RAPGEF6Q8TEU7 1601 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 MGEA5O60502 916 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 SRGAP2BP0DMP2 458 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 BTDP43251 543 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 JADE1Q6IE81 842 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 GALNT17Q6IS24 598 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 ZNF654Q8IZM8 581 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 CHMP6Q96FZ7 201 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 JPH2Q9BR39 696 aaPredicted RBP17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 PPME1Q9Y570 386 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 EDC4Q6P2E9 1401 aaKnown RBP17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 LRRIQ4A6NIV6 560 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 ADCY8P40145 1251 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 DOK7Q18PE1 504 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 ARMCX5Q6P1M9 558 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 GPIHBP1Q8IV16 184 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 ARHGAP6O43182 974 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 TRIM37O94972 964 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 CLCN1P35523 988 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 SCNN1DP51172 638 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 USP14P54578 494 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 IRX4P78413 519 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 hCG_1642624A0A1W2PR95 340 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 PSDA5PKW4 1024 aaPredicted RBP17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 HGSO14964 777 aaPredicted RBP17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 STX2P32856 288 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 AOC3Q16853 763 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 PSPC1Q8WXF1 523 aaKnown RBP17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 POMGNT1Q8WZA1 660 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 PPP1R12CQ9BZL4 782 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 WDR17Q8IZU2 1322 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 RASSF2P50749 326 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 FAM178BQ8IXR5 827 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 APOL6Q9BWW8 343 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 PCDHA12Q9UN75 941 aa17.23■□□□□ 0.35
NUCKS1-201ENST00000367142 PPP2R5AQ15172 486 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 KIAA0825Q8IV33 1275 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 RETREG2Q8NC44 543 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 SLF1Q9BQI6 1058 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 USP19O94966 1318 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 RYBPQ8N488 228 aaPredicted RBP17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 E7EWF7 191 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 TECP42680 631 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 PPP2R5EQ16537 467 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 CCDC51Q96ER9 411 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 PSMB7Q99436 277 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 THRAP3Q9Y2W1 955 aaKnown RBP17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 RABGAP1Q9Y3P9 1069 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 COL4A3BPQ9Y5P4 624 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 ABCB4P21439 1286 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 LRRC47Q8N1G4 583 aaKnown RBP17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 HEXIM1O94992 359 aaKnown RBP17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 POLA2Q14181 598 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms