RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 PDE1AP54750 535 aa12.37□□□□□ -0.43
PARP1-201ENST00000366790 SNX17Q15036 470 aa12.37□□□□□ -0.43
PARP1-201ENST00000366790 ALX1Q15699 326 aa12.37□□□□□ -0.43
PARP1-201ENST00000366790 LRIT3Q3SXY7 679 aa12.37□□□□□ -0.43
PARP1-201ENST00000366790 SNRNP48Q6IEG0 339 aaKnown RBP12.37□□□□□ -0.43
PARP1-201ENST00000366790 SLC38A10Q9HBR0 1119 aa12.37□□□□□ -0.43
PARP1-201ENST00000366790 ANAPC4Q9UJX5 808 aa12.37□□□□□ -0.43
PARP1-201ENST00000366790 DNAJC25-GNG10A0A024R161 153 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 KBTBD13C9JR72 458 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 PLA2G6O60733 806 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 ZBED4O75132 1171 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 PGK2P07205 417 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 FGRP09769 529 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 NOVP48745 357 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 TFAP4Q01664 338 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 PRAMEF19Q5SWL8 479 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 MAMDC4Q6UXC1 1216 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 ZNF467Q7Z7K2 595 aaPredicted RBP12.36□□□□□ -0.43
PARP1-201ENST00000366790 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 GMCL1Q96IK5 515 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 HELLSQ9NRZ9 838 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 MCM3APO60318 1980 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 SYNGAP1Q96PV0 1343 aa12.36□□□□□ -0.43
PARP1-201ENST00000366790 SOX1O00570 391 aaPredicted RBP12.35□□□□□ -0.43
PARP1-201ENST00000366790 ZNF865P0CJ78 1059 aaPredicted RBP12.35□□□□□ -0.43
PARP1-201ENST00000366790 RARBP10826 455 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 BMP3P12645 472 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 LRRC41Q15345 812 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 FAM47AQ5JRC9 791 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 GJC2Q5T442 439 aaPredicted RBP12.35□□□□□ -0.43
PARP1-201ENST00000366790 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 SLC39A5Q6ZMH5 540 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 SMC5Q8IY18 1101 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 LRRC47Q8N1G4 583 aaKnown RBP12.35□□□□□ -0.43
PARP1-201ENST00000366790 CHST13Q8NET6 341 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 FBXO40Q9UH90 709 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 RIPK3Q9Y572 518 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 ZMYM6O95789 1325 aa12.35□□□□□ -0.43
PARP1-201ENST00000366790 LTBP2Q14767 1821 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 ORC4O43929 436 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 AKR1A1P14550 325 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 STAT2P52630 851 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
PARP1-201ENST00000366790 RTP1P59025 263 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 ANO1Q5XXA6 986 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 CCDC129Q6ZRS4 1044 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 FAM160B2Q86V87 743 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 KIFC2Q96AC6 838 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 UBE2OQ9C0C9 1292 aaKnown RBP12.34□□□□□ -0.43
PARP1-201ENST00000366790 PHF24Q9UPV7 400 aa12.34□□□□□ -0.43
PARP1-201ENST00000366790 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
PARP1-201ENST00000366790 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 TAL1P17542 331 aaPredicted RBP12.33□□□□□ -0.44
PARP1-201ENST00000366790 MCMDC2Q4G0Z9 681 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 VPS53Q5VIR6 699 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 RNF180Q86T96 592 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 CPXCR1Q8N123 301 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 STAG1Q8WVM7 1258 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 LRCH3Q96II8 777 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
PARP1-201ENST00000366790 RAVER2Q9HCJ3 691 aaKnown RBP12.33□□□□□ -0.44
PARP1-201ENST00000366790 XPNPEP3Q9NQH7 507 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 IL17RBQ9NRM6 502 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 CNPY2Q9Y2B0 182 aa12.33□□□□□ -0.44
PARP1-201ENST00000366790 LAMA2P24043 3122 aaKnown RBP12.33□□□□□ -0.44
PARP1-201ENST00000366790 TMEM232C9JQI7 657 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 ADAMTS4O75173 837 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 SNAI1O95863 264 aaPredicted RBP12.32□□□□□ -0.44
PARP1-201ENST00000366790 FGAP02671 866 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 ADCYAP1R1P41586 468 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 SLC1A4P43007 532 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 CTDSPL2Q05D32 466 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 RCSD1Q6JBY9 416 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 FGD4Q96M96 766 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 LBHD1Q9BQE6 289 aaPredicted RBP12.32□□□□□ -0.44
PARP1-201ENST00000366790 OSBPL3Q9H4L5 887 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 TCP11L1Q9NUJ3 509 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 PRKAG2Q9UGJ0 569 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 FAM184BQ9ULE4 1060 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 ZNF536O15090 1300 aa12.32□□□□□ -0.44
PARP1-201ENST00000366790 COL6A3P12111 3177 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 A0A0D9SFI3 127 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 DUSP11O75319 330 aaKnown RBP12.31□□□□□ -0.44
PARP1-201ENST00000366790 PCP11498 1178 aaKnown RBP12.31□□□□□ -0.44
PARP1-201ENST00000366790 MCCP23508 829 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
PARP1-201ENST00000366790 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 KLHDC9Q8NEP7 349 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 LNPKQ9C0E8 428 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 ABHD16BQ9H3Z7 469 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
PARP1-201ENST00000366790 ACAD9Q9H845 621 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 STX8Q9UNK0 236 aa12.31□□□□□ -0.44
PARP1-201ENST00000366790 ATP11BQ9Y2G3 1177 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms