RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 DAAM2Q86T65 1068 aa13.28□□□□□ -0.28
CDC42BPA-203ENST00000366766 TMEM110-MUSTN1A8MSY1 372 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 MAP3K21Q5TCX8 1036 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 SEC62Q99442 399 aaKnown RBP13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 VCXQ9H320 206 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 VPS54Q9P1Q0 977 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 CTTNBP2NLQ9P2B4 639 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 DDX41Q9UJV9 622 aaKnown RBP13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 SMCO2A6NFE2 343 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 PHBP35232 272 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 PLS1Q14651 629 aa13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 ARL6IP4Q66PJ3 421 aaKnown RBP13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 FNBP4Q8N3X1 1017 aaPredicted RBP13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.28
CDC42BPA-203ENST00000366766 ORC2Q13416 577 aaPredicted RBP13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 LMNTD2Q8IXW0 634 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 TAB2Q9NYJ8 693 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 PTH1RQ03431 593 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 FAM204AQ9H8W3 233 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 STK17AQ9UEE5 414 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 TFAP4Q01664 338 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 LMNB2Q03252 620 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 PNMA1Q8ND90 353 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 TBC1D31Q96DN5 1066 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 TNKSO95271 1327 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 TRIM11Q96F44 468 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 SLAIN2Q9P270 581 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 GAS7O60861 476 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 LMNB1P20700 586 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 VCX3BQ9H321 246 aa13.27□□□□□ -0.29
CDC42BPA-203ENST00000366766 TLDC2A0PJX2 215 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 CCDC151A5D8V7 595 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 BPIFB4P59827 614 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 DPP8Q6V1X1 898 aaPredicted RBP13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 E7EVH7 732 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 FMNL1O95466 1100 aaPredicted RBP13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 PHLDB2Q86SQ0 1253 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 MYCT1Q8N699 235 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 ASIC3Q9UHC3 531 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 VIMP08670 466 aaKnown RBP13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 MFSD14BQ5SR56 506 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 RPN1P04843 607 aaKnown RBP13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 HPDP32754 393 aaPredicted RBP13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 SCRN1Q12765 414 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 HSPA6P17066 643 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 MCF2L2Q86YR7 1114 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 KIFC2Q96AC6 838 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 PCDHA12Q9UN75 941 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 CCDC169A6NNP5 214 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 NOL3O60936 208 aaKnown RBP13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 OAS2P29728 719 aaKnown RBP13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 MAP7Q14244 749 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 TSC1Q92574 1164 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 ORAI2Q96SN7 254 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 ODF2LQ9ULJ1 636 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 A1BGP04217 495 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 APOA5Q6Q788 366 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 CABS1Q96KC9 395 aa13.26□□□□□ -0.29
CDC42BPA-203ENST00000366766 ARHGEF40Q8TER5 1519 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 DCUN1D2Q6PH85 259 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 RRAGAQ7L523 313 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 RGS22Q8NE09 1264 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 SLF1Q9BQI6 1058 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 BPIFA3Q9BQP9 254 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 LEMD3Q9Y2U8 911 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 EPN1Q9Y6I3 576 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 RIC8AQ9NPQ8 531 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 DBNLQ9UJU6 430 aaKnown RBP13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 PALD1Q9ULE6 856 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 GAP43P17677 238 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 CTDSPL2Q05D32 466 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 IFNAR1P17181 557 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 ITIH3Q06033 890 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 PSTPIP2Q9H939 334 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 NRKQ7Z2Y5 1582 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 CEP104O60308 925 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 ATP2B4P23634 1241 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 DNAJC10Q8IXB1 793 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 CCDC89Q8N998 374 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 GNPTABQ3T906 1256 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 MRPL11Q9Y3B7 192 aaKnown RBP13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 NDUFA8P51970 172 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 CCDC105Q8IYK2 499 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 LARSQ9P2J5 1176 aaKnown RBP13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 IPO4Q8TEX9 1081 aaKnown RBP13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 PANX2Q96RD6 677 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 SH3GLB2Q9NR46 395 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 CDC23Q9UJX2 597 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 NEURL4Q96JN8 1562 aa13.25□□□□□ -0.29
CDC42BPA-203ENST00000366766 ZBED4O75132 1171 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 RNF40O75150 1001 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 KRT71Q3SY84 523 aa13.24□□□□□ -0.29
CDC42BPA-203ENST00000366766 ARHGEF25Q86VW2 580 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms