RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 TIMP1P01033 207 aa13.76□□□□□ -0.21
MRPL55-212ENST00000366739 CCSAPQ6IQ19 270 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-212ENST00000366739 AMOTL1Q8IY63 956 aa13.76□□□□□ -0.21
MRPL55-212ENST00000366739 KIF1BPQ96EK5 621 aa13.76□□□□□ -0.21
MRPL55-212ENST00000366739 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.76□□□□□ -0.21
MRPL55-212ENST00000366739 BOLA2Q9H3K6 86 aa13.76□□□□□ -0.21
MRPL55-212ENST00000366739 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-212ENST00000366739 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
MRPL55-212ENST00000366739 RIPK3Q9Y572 518 aa13.76□□□□□ -0.21
MRPL55-212ENST00000366739 BAZ2AQ9UIF9 1905 aaKnown RBP13.76□□□□□ -0.21
MRPL55-212ENST00000366739 PLXNA1Q9UIW2 1896 aa13.76□□□□□ -0.21
MRPL55-212ENST00000366739 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 SYNGAP1Q96PV0 1343 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 MOXD2PA6NHM9 499 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 GRXCR1A8MXD5 290 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 PBX2P40425 430 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 SNRNP48Q6IEG0 339 aaKnown RBP13.75□□□□□ -0.21
MRPL55-212ENST00000366739 MFSD5Q6N075 450 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 CTR9Q6PD62 1173 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 C16orf59Q7L2K0 433 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 SLF1Q9BQI6 1058 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 TEX13BQ9BXU2 312 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 SLC4A4Q9Y6R1 1079 aa13.75□□□□□ -0.21
MRPL55-212ENST00000366739 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 DNAJC25-GNG10A0A024R161 153 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 ADCY6O43306 1168 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 DUSP11O75319 330 aaKnown RBP13.74□□□□□ -0.21
MRPL55-212ENST00000366739 C6orf222P0C671 652 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-212ENST00000366739 SLC4A3P48751 1232 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 CDK7P50613 346 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 TMEM240Q5SV17 173 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 MSL3Q8N5Y2 521 aaKnown RBP13.74□□□□□ -0.21
MRPL55-212ENST00000366739 PPM1EQ8WY54 764 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 DDX11Q96FC9 970 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 DDRGK1Q96HY6 314 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 PBX4Q9BYU1 374 aa13.74□□□□□ -0.21
MRPL55-212ENST00000366739 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.74□□□□□ -0.21
MRPL55-212ENST00000366739 ELP1O95163 1332 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 TNFRSF10AO00220 468 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 ACRP10323 421 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 CSF2RAP15509 400 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 CST5P28325 142 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-212ENST00000366739 PPIGQ13427 754 aaKnown RBP eCLIP13.73□□□□□ -0.216e-7■■■■□ 20.4
MRPL55-212ENST00000366739 ACVR2BQ13705 512 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 UBE3CQ15386 1083 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 CCDC129Q6ZRS4 1044 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 SIRT2Q8IXJ6 389 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 CPXCR1Q8N123 301 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 GLT1D1Q96MS3 346 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 HAUS7Q99871 368 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 PRDM12Q9H4Q4 367 aa13.73□□□□□ -0.21
MRPL55-212ENST00000366739 MROH7Q68CQ1 1323 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 F5H6K3 240 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 NDUFB10O96000 172 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 ASGR1P07306 291 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 ATP5JP18859 108 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 KLRC3Q07444 240 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 CCDC144BQ3MJ40 725 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 ZNF467Q7Z7K2 595 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-212ENST00000366739 STK11IPQ8N1F8 1099 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 VTI1AQ96AJ9 217 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 FGD4Q96M96 766 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 GAS2L1Q99501 681 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-212ENST00000366739 PPP1R12CQ9BZL4 782 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 PUS7LQ9H0K6 701 aaKnown RBP13.72□□□□□ -0.21
MRPL55-212ENST00000366739 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-212ENST00000366739 CHD9Q3L8U1 2897 aa13.72□□□□□ -0.21
MRPL55-212ENST00000366739 A0A0U1RQG5 324 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-212ENST00000366739 ARVCFO00192 962 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 COL9A1P20849 921 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 RASA1P20936 1047 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 GJA9P57773 515 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 GNASQ5JWF2 1037 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 CCDC174Q6PII3 467 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 ZNF365Q70YC5 407 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 FAM126BQ8IXS8 530 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 TMEM199Q8N511 208 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 PRPF38AQ8NAV1 312 aaKnown RBP13.71□□□□□ -0.21
MRPL55-212ENST00000366739 PCSK9Q8NBP7 692 aaKnown RBP13.71□□□□□ -0.21
MRPL55-212ENST00000366739 KIFC2Q96AC6 838 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 UPF3AQ9H1J1 476 aaKnown RBP13.71□□□□□ -0.21
MRPL55-212ENST00000366739 SPC25Q9HBM1 224 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 RAVER2Q9HCJ3 691 aaKnown RBP13.71□□□□□ -0.21
MRPL55-212ENST00000366739 NYAP2Q9P242 653 aa13.71□□□□□ -0.21
MRPL55-212ENST00000366739 ARPP21Q9UBL0 812 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-212ENST00000366739 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-212ENST00000366739 ATP2A1O14983 1001 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 CTAGE5O15320 804 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 ZBED4O75132 1171 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 RAB11FIP3O75154 756 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 HMMRO75330 724 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 CYP2C18P33260 490 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
MRPL55-212ENST00000366739 ADGRE1Q14246 886 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 AKNAD1Q5T1N1 836 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
MRPL55-212ENST00000366739 ARMCX2Q7L311 632 aa13.7□□□□□ -0.22
MRPL55-212ENST00000366739 RPAP2Q8IXW5 612 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms