RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 METTL16Q86W50 562 aaKnown RBP13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 PI4KBQ9UBF8 816 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 IVNS1ABPQ9Y6Y0 642 aa13.26□□□□□ -0.29
CSNK1E-202ENST00000366216 MCM3APO60318 1980 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 LRRC37A2A6NM11 1700 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 TCRBV5S4A2TA0A5A2 114 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 IDH1O75874 414 aaKnown RBP13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 CLTBP09497 229 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 HSPD1P10809 573 aaKnown RBP13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 PDE6AP16499 860 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 PSMA5P28066 241 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 FPGSQ05932 587 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 KRT32Q14532 448 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 SLFNL1Q499Z3 407 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 ADGRA1Q86SQ6 560 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 FERMT2Q96AC1 680 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 BTBD7Q9P203 1132 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 TACC3Q9Y6A5 838 aa13.25□□□□□ -0.29
CSNK1E-202ENST00000366216 ZNF532Q9HCE3 1301 aa13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 KIAA0355O15063 1070 aa13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 RAG1P15918 1043 aa13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 TMED8Q6PL24 325 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 TEX11Q8IYF3 940 aa13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 TTC14Q96N46 770 aa13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 PUS7LQ9H0K6 701 aaKnown RBP13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 GINM1Q9NU53 330 aa13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 ZBTB21Q9ULJ3 1066 aa13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 HCN4Q9Y3Q4 1203 aa13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 PRRC2BQ5JSZ5 2229 aaKnown RBP13.24□□□□□ -0.29
CSNK1E-202ENST00000366216 BRWD1Q9NSI6 2320 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 SEPT4O43236 478 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 GPAA1O43292 621 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 LDHCP07864 332 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 DDIT3P35638 169 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 GSTO1P78417 241 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 LRRC41Q15345 812 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 CCDC85BQ15834 202 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 VPS53Q5VIR6 699 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 RUFY3Q7L099 469 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 JAKMIP1Q96N16 626 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 UPF3BQ9BZI7 483 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 ALDH8A1Q9H2A2 487 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 DHX36Q9H2U1 1008 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 PRDM12Q9H4Q4 367 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 CTNNA3Q9UI47 895 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 CIZ1Q9ULV3 898 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 CYP46A1Q9Y6A2 500 aa13.23□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L15C9J2P7 530 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L13C9JLJ4 530 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L11C9JVI0 530 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L18D6R9N7 530 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L22D6RA61 530 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L17D6RBQ6 530 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L19D6RCP7 530 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L20D6RJB6 530 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 CYP21A2P08686 494 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 USP17L24Q0WX57 530 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 ADCK5Q3MIX3 580 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 PRAMEF19Q5SWL8 479 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 OLFML2BQ68BL8 750 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 DPP9Q86TI2 863 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 MAGEB6Q8N7X4 407 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 ACER1Q8TDN7 264 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 NECAB3Q96P71 396 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 SLKQ9H2G2 1235 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 CHMP5Q9NZZ3 219 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 LRP2BPQ9P2M1 347 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 PHF24Q9UPV7 400 aa13.22□□□□□ -0.29
CSNK1E-202ENST00000366216 FOXP2O15409 715 aa13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 CUL4AQ13619 759 aa13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 ALX1Q15699 326 aa13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 CRACR2BQ8N4Y2 399 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 TGFBRAP1Q8WUH2 860 aa13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 TMX3Q96JJ7 454 aa13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 C12orf42Q96LP6 360 aa13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 TRIM34Q9BYJ4 488 aa13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 AATFQ9NY61 560 aaKnown RBP eCLIP13.21□□□□□ -0.29
CSNK1E-202ENST00000366216 FLT1P17948 1338 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 PQBP1O60828 265 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 COBLO75128 1261 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 GNAT2P19087 354 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 ADORA2AP29274 412 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 PBX2P40425 430 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 ADGRE1Q14246 886 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 BLOC1S2Q6QNY1 142 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 LBX2Q6XYB7 198 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 CATSPERGQ6ZRH7 1159 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 FOXP4Q8IVH2 680 aaPredicted RBP13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-202ENST00000366216 STRBPQ96SI9 672 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms