RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ORC4O43929 436 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 RAD21O60216 631 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 FGAP02671 866 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 COPB2P35606 906 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 ZNF792Q3KQV3 632 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 ZNF589Q86UQ0 364 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 SLC38A10Q9HBR0 1119 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 FEM1BQ9UK73 627 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 RIPK3Q9Y572 518 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 ZMYM6O95789 1325 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 TRIOBPQ9H2D6 2365 aa16.24■□□□□ 0.19
TNFRSF1A-202ENST00000366159 HSPD1P10809 573 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-202ENST00000366159 NMIQ13287 307 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1A-202ENST00000366159 LRRC47Q8N1G4 583 aaKnown RBP16.23■□□□□ 0.19
TNFRSF1A-202ENST00000366159 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
TNFRSF1A-202ENST00000366159 MMP19Q99542 508 aa16.23■□□□□ 0.19
TNFRSF1A-202ENST00000366159 TEX13BQ9BXU2 312 aa16.23■□□□□ 0.19
TNFRSF1A-202ENST00000366159 LAMA3Q16787 3333 aa16.22■□□□□ 0.19
TNFRSF1A-202ENST00000366159 SEPT4O43236 478 aa16.22■□□□□ 0.19
TNFRSF1A-202ENST00000366159 PGK2P07205 417 aa16.22■□□□□ 0.19
TNFRSF1A-202ENST00000366159 SLFN13Q68D06 897 aa16.22■□□□□ 0.19
TNFRSF1A-202ENST00000366159 NRBP1Q9UHY1 535 aa16.22■□□□□ 0.19
TNFRSF1A-202ENST00000366159 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-202ENST00000366159 PLXNA1Q9UIW2 1896 aa16.22■□□□□ 0.19
TNFRSF1A-202ENST00000366159 DNAJC25-GNG10A0A024R161 153 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 TRIM6-TRIM34B2RNG4 842 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 NMT2O60551 498 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 PLA2G6O60733 806 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 BMP3P12645 472 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 SDSP20132 328 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 CNGA1P29973 690 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 OAZ1P54368 228 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 KCTD2Q14681 263 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 PPP4R3BQ5MIZ7 849 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 PRAMEF19Q5SWL8 479 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 SNRNP48Q6IEG0 339 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 GDF15Q99988 308 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 TINF2Q9BSI4 451 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 CCDC171Q6TFL3 1326 aa16.21■□□□□ 0.19
TNFRSF1A-202ENST00000366159 TSPY2A6NKD2 308 aa16.2■□□□□ 0.18
TNFRSF1A-202ENST00000366159 DNM1LO00429 736 aa16.2■□□□□ 0.18
TNFRSF1A-202ENST00000366159 ZBED4O75132 1171 aa16.2■□□□□ 0.18
TNFRSF1A-202ENST00000366159 FDX1P10109 184 aa16.2■□□□□ 0.18
TNFRSF1A-202ENST00000366159 LRRC26Q2I0M4 334 aa16.2■□□□□ 0.18
TNFRSF1A-202ENST00000366159 C7orf61Q8IZ16 206 aa16.2■□□□□ 0.18
TNFRSF1A-202ENST00000366159 RILPL2Q969X0 211 aa16.2■□□□□ 0.18
TNFRSF1A-202ENST00000366159 KIFC2Q96AC6 838 aa16.2■□□□□ 0.18
TNFRSF1A-202ENST00000366159 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
TNFRSF1A-202ENST00000366159 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 ZNF536O15090 1300 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 BMP8BP34820 402 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 STAT2P52630 851 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 MAMDC4Q6UXC1 1216 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 MSL3Q8N5Y2 521 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 STAG1Q8WVM7 1258 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 RAVER2Q9HCJ3 691 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 TCP11L1Q9NUJ3 509 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 STX8Q9UNK0 236 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 A0A1W2PPC1 479 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 ZNF865P0CJ78 1059 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 TAL1P17542 331 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 MCCP23508 829 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 SLC1A4P43007 532 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 RCSD1Q6JBY9 416 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 FAM160B2Q86V87 743 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 CPXCR1Q8N123 301 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 CHST13Q8NET6 341 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 CHURC1Q8WUH1 139 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 FGD4Q96M96 766 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 SENP6Q9GZR1 1112 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 PCDH10Q9P2E7 1040 aa16.19■□□□□ 0.18
TNFRSF1A-202ENST00000366159 SMCHD1A6NHR9 2005 aa16.18■□□□□ 0.18
TNFRSF1A-202ENST00000366159 RANBP6O60518 1105 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1A-202ENST00000366159 GJC2Q5T442 439 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-202ENST00000366159 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
TNFRSF1A-202ENST00000366159 ZNF467Q7Z7K2 595 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-202ENST00000366159 ARRDC4Q8NCT1 418 aa16.18■□□□□ 0.18
TNFRSF1A-202ENST00000366159 ZMYND8Q9ULU4 1186 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-202ENST00000366159 SYNGAP1Q96PV0 1343 aa16.17■□□□□ 0.18
TNFRSF1A-202ENST00000366159 SNAI1O95863 264 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1A-202ENST00000366159 PCP11498 1178 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-202ENST00000366159 PDE4AP27815 886 aa16.17■□□□□ 0.18
TNFRSF1A-202ENST00000366159 MFAP1P55081 439 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-202ENST00000366159 AKNAD1Q5T1N1 836 aa16.17■□□□□ 0.18
TNFRSF1A-202ENST00000366159 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
TNFRSF1A-202ENST00000366159 FBXO40Q9UH90 709 aa16.17■□□□□ 0.18
TNFRSF1A-202ENST00000366159 SYN1P17600 705 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 HAND2P61296 217 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 SNX17Q15036 470 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 LRRC41Q15345 812 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 BTNL9Q6UXG8 535 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 KCTD1Q719H9 257 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 TBC1D10CQ8IV04 446 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 DDX11Q96FC9 970 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 AGBL1Q96MI9 1066 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 TMEM47Q9BQJ4 181 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 PRR12Q9ULL5 1215 aa16.16■□□□□ 0.18
TNFRSF1A-202ENST00000366159 TOP1P11387 765 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms