RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 RASGRF1Q13972 1273 aa20.58■□□□□ 0.89
CLIP2-202ENST00000361545 MASTLQ96GX5 879 aa20.58■□□□□ 0.89
CLIP2-202ENST00000361545 MAGEA1P43355 309 aa20.58■□□□□ 0.88
CLIP2-202ENST00000361545 GALNT17Q6IS24 598 aa20.58■□□□□ 0.88
CLIP2-202ENST00000361545 STMN4Q9H169 189 aaPredicted RBP20.58■□□□□ 0.88
CLIP2-202ENST00000361545 KANSL2Q9H9L4 492 aa20.58■□□□□ 0.88
CLIP2-202ENST00000361545 OSBP2Q969R2 916 aa20.58■□□□□ 0.88
CLIP2-202ENST00000361545 IWS1Q96ST2 819 aa20.58■□□□□ 0.88
CLIP2-202ENST00000361545 BSDC1Q9NW68 430 aaPredicted RBP20.58■□□□□ 0.88
CLIP2-202ENST00000361545 MECOMQ03112 1051 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 ZNF827Q17R98 1081 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 CCDC14Q49A88 953 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 FAM178BQ8IXR5 827 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 TRMT2AQ8IZ69 625 aaKnown RBP20.57■□□□□ 0.88
CLIP2-202ENST00000361545 ZFP91Q96JP5 570 aaPredicted RBP20.57■□□□□ 0.88
CLIP2-202ENST00000361545 ST7Q9NRC1 585 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 MYO1AQ9UBC5 1043 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 ZNF75DP51815 510 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 YARSP54577 528 aaKnown RBP20.57■□□□□ 0.88
CLIP2-202ENST00000361545 MTX1Q13505 466 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 UAP1Q16222 522 aaPredicted RBP20.57■□□□□ 0.88
CLIP2-202ENST00000361545 APOA5Q6Q788 366 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 RRAGAQ7L523 313 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 ASPRV1Q53RT3 343 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 PGBD1Q96JS3 809 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 LMBRD1Q9NUN5 540 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 PANK4Q9NVE7 773 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 MTMR6Q9Y217 621 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 GAS8O95995 478 aa20.57■□□□□ 0.88
CLIP2-202ENST00000361545 DNAJC21Q5F1R6 531 aaKnown RBP20.57■□□□□ 0.88
CLIP2-202ENST00000361545 CCDC84Q86UT8 332 aaPredicted RBP20.57■□□□□ 0.88
CLIP2-202ENST00000361545 LRRIQ4A6NIV6 560 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 XRCC5P13010 732 aaKnown RBP20.56■□□□□ 0.88
CLIP2-202ENST00000361545 POLGP54098 1239 aaPredicted RBP20.56■□□□□ 0.88
CLIP2-202ENST00000361545 MXRA7P84157 204 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 CLEC4GQ6UXB4 293 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.56■□□□□ 0.88
CLIP2-202ENST00000361545 CCDC26Q8TAB7 109 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 PSMB7Q99436 277 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 CCNA1P78396 465 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 SFMBT2Q5VUG0 894 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 KRT26Q7Z3Y9 468 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 A2ML1A8K2U0 1454 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 ZBTB7AO95365 584 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 RTKN2Q8IZC4 609 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 UBL4BQ8N7F7 174 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 CSRNP2Q9H175 543 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 PNMA2Q9UL42 364 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 NR1I2O75469 434 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 USP14P54578 494 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 UBLCP1Q8WVY7 318 aaPredicted RBP20.56■□□□□ 0.88
CLIP2-202ENST00000361545 SECISBP2LQ93073 1101 aaKnown RBP20.56■□□□□ 0.88
CLIP2-202ENST00000361545 KCNK9Q9NPC2 374 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 PIH1D3Q9NQM4 214 aaKnown RBP20.56■□□□□ 0.88
CLIP2-202ENST00000361545 LPXNO60711 386 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 FOSP01100 380 aaPredicted RBP20.56■□□□□ 0.88
CLIP2-202ENST00000361545 KIAA1524Q8TCG1 905 aa20.56■□□□□ 0.88
CLIP2-202ENST00000361545 NAP1L3Q99457 506 aaPredicted RBP20.56■□□□□ 0.88
CLIP2-202ENST00000361545 NAPGQ99747 312 aaPredicted RBP20.56■□□□□ 0.88
CLIP2-202ENST00000361545 MRRFQ96E11 262 aaKnown RBP20.55■□□□□ 0.88
CLIP2-202ENST00000361545 ZNF365Q70YC5 407 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 SLC39A2Q9NP94 309 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 CLIC4Q9Y696 253 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 TYW1BQ6NUM6 668 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 SYNE4Q8N205 404 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 ADPGKQ9BRR6 497 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 PI4KBQ9UBF8 816 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 SOS2Q07890 1332 aaPredicted RBP20.55■□□□□ 0.88
CLIP2-202ENST00000361545 SASH1O94885 1247 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 CFAP58Q5T655 872 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 SEPT14Q6ZU15 432 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 ARMC9Q7Z3E5 817 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 PIGSQ96S52 555 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 SLF1Q9BQI6 1058 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 PIM2Q9P1W9 311 aa20.55■□□□□ 0.88
CLIP2-202ENST00000361545 SNAP23O00161 211 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 BMP3P12645 472 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 P4HA1P13674 534 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 CACNB3P54284 484 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 SESTD1Q86VW0 696 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 LSM14BQ9BX40 385 aaKnown RBP20.54■□□□□ 0.88
CLIP2-202ENST00000361545 TRIM31Q9BZY9 425 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 KIAA1468Q9P260 1216 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 LARSQ9P2J5 1176 aaKnown RBP20.54■□□□□ 0.88
CLIP2-202ENST00000361545 PLA2R1Q13018 1463 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 IRX5P78411 483 aaPredicted RBP20.54■□□□□ 0.88
CLIP2-202ENST00000361545 LRCH2Q5VUJ6 765 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 NSRP1Q9H0G5 558 aaKnown RBP20.54■□□□□ 0.88
CLIP2-202ENST00000361545 DHX36Q9H2U1 1008 aaKnown RBP20.54■□□□□ 0.88
CLIP2-202ENST00000361545 NRBP2Q9NSY0 501 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 H7C1W4 665 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 DLATP10515 647 aaKnown RBP20.54■□□□□ 0.88
CLIP2-202ENST00000361545 OSBPP22059 807 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 FBXO18Q8NFZ0 1043 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 SYMPKQ92797 1274 aaKnown RBP20.54■□□□□ 0.88
CLIP2-202ENST00000361545 CCDC127Q96BQ5 260 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 MMS19Q96T76 1030 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 COA1Q9GZY4 146 aa20.54■□□□□ 0.88
CLIP2-202ENST00000361545 USP17L2Q6R6M4 530 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms