RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
HPS1-204ENST00000361490 TANGO6Q9C0B7 1094 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 PSTPIP2Q9H939 334 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 KANSL2Q9H9L4 492 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 YDJCA8MPS7 323 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 CYTH3O43739 400 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 POSTNQ15063 836 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 CDAN1Q8IWY9 1227 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 PDHBP11177 359 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 PLS1Q14651 629 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 TYW1BQ6NUM6 668 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 RSBN1LQ6PCB5 846 aaPredicted RBP13.19□□□□□ -0.3
HPS1-204ENST00000361490 KRBA2Q6ZNG9 492 aa13.19□□□□□ -0.3
HPS1-204ENST00000361490 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
HPS1-204ENST00000361490 SPDYE3A6NKU9 549 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 WNT7AO00755 349 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 CHMP2AO43633 222 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 ECE1P42892 770 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 MRPL12P52815 198 aaKnown RBP13.18□□□□□ -0.3
HPS1-204ENST00000361490 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
HPS1-204ENST00000361490 ADGRF4Q8IZF3 695 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 FBXL16Q8N461 479 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 SWAP70Q9UH65 585 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 STK36Q9NRP7 1315 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 ADAMTS3O15072 1205 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 DYMQ7RTS9 669 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 PHF20Q9BVI0 1012 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
HPS1-204ENST00000361490 MYO5AQ9Y4I1 1855 aaKnown RBP13.18□□□□□ -0.3
HPS1-204ENST00000361490 IQUBQ8NA54 791 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 CUL5Q93034 780 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
HPS1-204ENST00000361490 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 ZNF408Q9H9D4 720 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 ARHGEF10LQ9HCE6 1279 aa13.18□□□□□ -0.3
HPS1-204ENST00000361490 BAZ2AQ9UIF9 1905 aaKnown RBP13.17□□□□□ -0.3
HPS1-204ENST00000361490 NEMFO60524 1076 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 TMEM266Q2M3C6 531 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 UVSSAQ2YD98 709 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 AXDND1Q5T1B0 1012 aaPredicted RBP13.17□□□□□ -0.3
HPS1-204ENST00000361490 ZDHHC15Q96MV8 337 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 SMTNL1A8MU46 457 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 PPP6R2O75170 966 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 PRR29P0C7W0 189 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 SHMT1P34896 483 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 ASIC1P78348 528 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 SP4Q02446 784 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 LRMPQ12912 555 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 RASA3Q14644 834 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 GPIHBP1Q8IV16 184 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 POLD4Q9HCU8 107 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 N4BP2Q86UW6 1770 aaPredicted RBP13.17□□□□□ -0.3
HPS1-204ENST00000361490 PDS5AQ29RF7 1337 aaKnown RBP13.17□□□□□ -0.3
HPS1-204ENST00000361490 H7C1D1 291 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 UBASH3AP57075 661 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 FOXP4Q8IVH2 680 aaPredicted RBP13.17□□□□□ -0.3
HPS1-204ENST00000361490 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 ZNF70Q9UC06 446 aaPredicted RBP13.17□□□□□ -0.3
HPS1-204ENST00000361490 FAM198AQ9UFP1 575 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
HPS1-204ENST00000361490 PTPREP23469 700 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 C15orf52Q6ZUT6 534 aaKnown RBP13.16□□□□□ -0.3
HPS1-204ENST00000361490 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 LZTS2Q9BRK4 669 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 DDX39AO00148 427 aaKnown RBP13.16□□□□□ -0.3
HPS1-204ENST00000361490 BMP15O95972 392 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 MICALL2Q8IY33 904 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 SUGT1Q9Y2Z0 365 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 KLRG2A4D1S0 409 aaPredicted RBP13.16□□□□□ -0.3
HPS1-204ENST00000361490 TPM3P06753 285 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 CDC37Q16543 378 aaPredicted RBP13.16□□□□□ -0.3
HPS1-204ENST00000361490 CALCRLQ16602 461 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 ASPRV1Q53RT3 343 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 BARHL2Q9NY43 387 aa13.16□□□□□ -0.3
HPS1-204ENST00000361490 GAKO14976 1311 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 SORBS3O60504 671 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 BMP3P12645 472 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 PTPAQ15257 358 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 PRR16Q569H4 304 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
HPS1-204ENST00000361490 CCDC43Q96MW1 224 aaKnown RBP13.15□□□□□ -0.3
HPS1-204ENST00000361490 TMX1Q9H3N1 280 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 TBC1D7Q9P0N9 293 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 LRWD1Q9UFC0 647 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.3
HPS1-204ENST00000361490 CNOT7Q9UIV1 285 aaKnown RBP13.15□□□□□ -0.3
HPS1-204ENST00000361490 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 SAMM50Q9Y512 469 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
HPS1-204ENST00000361490 TNIP1Q15025 636 aa13.15□□□□□ -0.3
HPS1-204ENST00000361490 QRICH1Q2TAL8 776 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms