RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 NYAP2Q9P242 653 aa15.09■□□□□ 0.01
SQSTM1-201ENST00000360718 FRMPD2Q68DX3 1309 aaPredicted RBP15.08■□□□□ 0.01
SQSTM1-201ENST00000360718 KIF28PB7ZC32 967 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 LMOD1P29536 600 aaPredicted RBP15.08■□□□□ 0
SQSTM1-201ENST00000360718 GTF2F1P35269 517 aaKnown RBP eCLIP15.08■□□□□ 07e-6■□□□□ 8.1
SQSTM1-201ENST00000360718 BRAPQ7Z569 592 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 CCDC84Q86UT8 332 aaPredicted RBP15.08■□□□□ 0
SQSTM1-201ENST00000360718 SPC24Q8NBT2 197 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 ZNF396Q96N95 335 aaPredicted RBP15.08■□□□□ 0
SQSTM1-201ENST00000360718 ZBTB21Q9ULJ3 1066 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 SSC5DA1L4H1 1573 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 KLRF2D3W0D1 207 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 LUZP1Q86V48 1076 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 MKL1Q969V6 931 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 L3MBTL3Q96JM7 780 aaPredicted RBP15.08■□□□□ 0
SQSTM1-201ENST00000360718 PGBD1Q96JS3 809 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 KCNJ14Q9UNX9 436 aa15.08■□□□□ 0
SQSTM1-201ENST00000360718 NR1I2O75469 434 aa15.07■□□□□ 0
SQSTM1-201ENST00000360718 CAP2P40123 477 aa15.07■□□□□ 0
SQSTM1-201ENST00000360718 ECE1P42892 770 aa15.07■□□□□ 0
SQSTM1-201ENST00000360718 ASPRV1Q53RT3 343 aa15.07■□□□□ 0
SQSTM1-201ENST00000360718 APOBEC3FQ8IUX4 373 aaKnown RBP15.07■□□□□ 0
SQSTM1-201ENST00000360718 DRC7Q8IY82 874 aa15.07■□□□□ 0
SQSTM1-201ENST00000360718 ZNF165P49910 485 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 DPY19L2Q6NUT2 758 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 ACER1Q8TDN7 264 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 TRIM5Q9C035 493 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 UBA5Q9GZZ9 404 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 VPS54Q9P1Q0 977 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 GLTPD2A6NH11 291 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 SCG2P13521 617 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 SMARCA1P28370 1054 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 KIF23Q02241 960 aaPredicted RBP15.06■□□□□ 0
SQSTM1-201ENST00000360718 TTBK2Q6IQ55 1244 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 GLIS2Q9BZE0 524 aaPredicted RBP15.06■□□□□ 0
SQSTM1-201ENST00000360718 RCOR1Q9UKL0 485 aa15.06■□□□□ 0
SQSTM1-201ENST00000360718 POTECB2RU33 542 aa15.05■□□□□ 0
SQSTM1-201ENST00000360718 MMP1P03956 469 aa15.05■□□□□ 0
SQSTM1-201ENST00000360718 ZNF543Q08ER8 600 aa15.05■□□□□ 0
SQSTM1-201ENST00000360718 KIAA1755Q5JYT7 1200 aa15.05■□□□□ 0
SQSTM1-201ENST00000360718 KCTD1Q719H9 257 aa15.05■□□□□ 0
SQSTM1-201ENST00000360718 HOOK2Q96ED9 719 aa15.05■□□□□ 0
SQSTM1-201ENST00000360718 SPZ1Q9BXG8 430 aa15.05■□□□□ 0
SQSTM1-201ENST00000360718 KCNF1Q9H3M0 494 aa15.05■□□□□ 0
SQSTM1-201ENST00000360718 GPCPD1Q9NPB8 672 aa15.05■□□□□ 0
SQSTM1-201ENST00000360718 GOLGA6L19H0YKK7 550 aa15.05■□□□□ -0
SQSTM1-201ENST00000360718 ADAMTS3O15072 1205 aa15.05■□□□□ -0
SQSTM1-201ENST00000360718 INPP5BP32019 993 aa15.05■□□□□ -0
SQSTM1-201ENST00000360718 ZNF75DP51815 510 aa15.05■□□□□ -0
SQSTM1-201ENST00000360718 PFKFB3Q16875 520 aaPredicted RBP15.05■□□□□ -0
SQSTM1-201ENST00000360718 GPATCH4Q5T3I0 446 aaKnown RBP15.05■□□□□ -0
SQSTM1-201ENST00000360718 C17orf53Q8N3J3 647 aaPredicted RBP15.05■□□□□ -0
SQSTM1-201ENST00000360718 FTOQ9C0B1 505 aaKnown RBP eCLIP15.05■□□□□ -0
SQSTM1-201ENST00000360718 BRMS1Q9HCU9 246 aa15.05■□□□□ -0
SQSTM1-201ENST00000360718 F5H6K3 240 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 RAD21O60216 631 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 KLRC3Q07444 240 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 TYW1BQ6NUM6 668 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 CCDC73Q6ZRK6 1079 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 PLA2G4DQ86XP0 818 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 GPKOWQ92917 476 aaPredicted RBP eCLIP15.04■□□□□ -0
SQSTM1-201ENST00000360718 NUP88Q99567 741 aaPredicted RBP15.04■□□□□ -0
SQSTM1-201ENST00000360718 ARHGEF10LQ9HCE6 1279 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 SEC63Q9UGP8 760 aaKnown RBP15.04■□□□□ -0
SQSTM1-201ENST00000360718 PYCARDQ9ULZ3 195 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 ADM5C9JUS6 153 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 SLC16A2P36021 539 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 NPY5RQ15761 445 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 CCDC96Q2M329 555 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 OXER1Q8TDS5 423 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 RRP36Q96EU6 259 aaKnown RBP15.04■□□□□ -0
SQSTM1-201ENST00000360718 VAT1LQ9HCJ6 419 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 PITPNM2Q9BZ72 1349 aa15.04■□□□□ -0
SQSTM1-201ENST00000360718 ZC3H4Q9UPT8 1303 aaKnown RBP15.04■□□□□ -0
SQSTM1-201ENST00000360718 SCN4AP35499 1836 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 NDUFB10O96000 172 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 PTGS1P23219 599 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 U2AF2P26368 475 aaKnown RBP eCLIP15.03■□□□□ -02e-10■□□□□ 8.4
SQSTM1-201ENST00000360718 CDC25BP30305 580 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 EPHX2P34913 555 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 DCAF15Q66K64 600 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 SLFN13Q68D06 897 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 CCDC186Q7Z3E2 898 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 CCAR1Q8IX12 1150 aaKnown RBP15.03■□□□□ -0
SQSTM1-201ENST00000360718 DIS3L2Q8IYB7 885 aaKnown RBP15.03■□□□□ -0
SQSTM1-201ENST00000360718 DCAF4Q8WV16 495 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 FOXP1Q9H334 677 aaPredicted RBP15.03■□□□□ -0
SQSTM1-201ENST00000360718 RIOX1Q9H6W3 641 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 SH3GLB2Q9NR46 395 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 SYNPO2Q9UMS6 1093 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 DOCK1Q14185 1865 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 BTBD18B2RXH4 712 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 ASNSP08243 561 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 SPICE1Q8N0Z3 855 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 GMCL1P1Q8NEA9 526 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 PIGSQ96S52 555 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 PHF20Q9BVI0 1012 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 DNAJC25Q9H1X3 360 aa15.03■□□□□ -0
SQSTM1-201ENST00000360718 CALML3P27482 149 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms