RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 IGHDP01880 384 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 NSFP46459 744 aaKnown RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 SPATS2Q86XZ4 545 aaKnown RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 LRWD1Q9UFC0 647 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 KNTC1P50748 2209 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 JAG2Q9Y219 1238 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 MMS19Q96T76 1030 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 SDK1Q7Z5N4 2213 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 LAD1O00515 517 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 GPATCH8Q9UKJ3 1502 aaKnown RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 TRAPPC8Q9Y2L5 1435 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 TTC4O95801 387 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 LONRF2Q1L5Z9 754 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 TRIM11Q96F44 468 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 FAM102BQ5T8I3 360 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 NRBP2Q9NSY0 501 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 TPRP12270 2363 aaKnown RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 FOSP01100 380 aaPredicted RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 LIG4P49917 911 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 TRIM42Q8IWZ5 723 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 NME8Q8N427 588 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 LSM14BQ9BX40 385 aaKnown RBP10.61□□□□□ -0.71
CUX1-203ENST00000360264 PPIP5K2O43314 1243 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 PPARAQ07869 468 aa10.61□□□□□ -0.71
CUX1-203ENST00000360264 CFBP00751 764 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 CCDC13Q8IYE1 715 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 MED4Q9NPJ6 270 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 CWF19L2Q2TBE0 894 aaKnown RBP10.6□□□□□ -0.71
CUX1-203ENST00000360264 RRAGAQ7L523 313 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 CABP7Q86V35 215 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 KIF24Q5T7B8 1368 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 ECE1P42892 770 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 SULF1Q8IWU6 871 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 CPXCR1Q8N123 301 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 ZNF408Q9H9D4 720 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 SLC52A2Q9HAB3 445 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 ZNF713Q8N859 430 aaPredicted RBP10.6□□□□□ -0.71
CUX1-203ENST00000360264 RETREG2Q8NC44 543 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 HESX1Q9UBX0 185 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 KBTBD3Q8NAB2 608 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 GBP5Q96PP8 586 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 CACTINQ8WUQ7 758 aaKnown RBP10.6□□□□□ -0.71
CUX1-203ENST00000360264 SAR1BQ9Y6B6 198 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
CUX1-203ENST00000360264 WDR64B1ANS9 1081 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 ARMCX3Q9UH62 379 aaPredicted RBP10.6□□□□□ -0.71
CUX1-203ENST00000360264 ERCC3P19447 782 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 VAMP4O75379 141 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 MORC3Q14149 939 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 ABI1Q8IZP0 508 aa10.6□□□□□ -0.71
CUX1-203ENST00000360264 BLMP54132 1417 aaPredicted RBP10.59□□□□□ -0.71
CUX1-203ENST00000360264 NEK8Q86SG6 692 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 ATF2P15336 505 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 BSPRYQ5W0U4 402 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 K7ENM7 598 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 GCNAQ96QF7 691 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 PRAG1Q86YV5 1406 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 TESPA1A2RU30 521 aaPredicted RBP10.59□□□□□ -0.71
CUX1-203ENST00000360264 STX2P32856 288 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 CDR2Q01850 454 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 BRD3Q15059 726 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 XKR9Q5GH70 373 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 TGFBRAP1Q8WUH2 860 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 PLXNC1O60486 1568 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 SURF1Q15526 300 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 PARD3Q8TEW0 1356 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 BAG6P46379 1132 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 CCDC93Q567U6 631 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 TBC1D7Q9P0N9 293 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 CLGNO14967 610 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 MFAP3P55082 362 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 RNASE9P60153 205 aaKnown RBP10.59□□□□□ -0.71
CUX1-203ENST00000360264 TAB2Q9NYJ8 693 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 THEGQ9P2T0 379 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 STK17AQ9UEE5 414 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 ARHGEF12Q9NZN5 1544 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 SLC8A1P32418 973 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 MFSD14BQ5SR56 506 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 TYW1BQ6NUM6 668 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 EP400NLQ6ZTU2 488 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 BZW1Q7L1Q6 419 aaKnown RBP10.59□□□□□ -0.71
CUX1-203ENST00000360264 DIS3L2Q8IYB7 885 aaKnown RBP10.59□□□□□ -0.71
CUX1-203ENST00000360264 VPS16Q9H269 839 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 TMEM191BP0C7N4 346 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 MUM1Q2TAK8 710 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 TEKT3Q9BXF9 490 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 PRKAG2Q9UGJ0 569 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 RNF8O76064 485 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 MMEL1Q495T6 779 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 EIF2AQ9BY44 585 aaKnown RBP10.59□□□□□ -0.71
CUX1-203ENST00000360264 ZNF75DP51815 510 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 PSTPIP2Q9H939 334 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 PCDHB15Q9Y5E8 787 aa10.59□□□□□ -0.71
CUX1-203ENST00000360264 A6NJR5 290 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 MYL1P05976 194 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 ARHGAP42A6NI28 874 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 PPP2R5CQ13362 524 aa10.58□□□□□ -0.72
CUX1-203ENST00000360264 METTL23Q86XA0 190 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms