RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 GJB2P29033 226 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 LIG3P49916 1009 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 INHBEP58166 350 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 KRT85P78386 507 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 PTSQ03393 145 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 CCDC152Q4G0S7 254 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 NAIF1Q69YI7 327 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 TTC19Q6DKK2 380 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 PTCRAQ6ISU1 281 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 TRIM65Q6PJ69 517 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 PLCD4Q9BRC7 762 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 MCOLN1Q9GZU1 580 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 CLSTN2Q9H4D0 955 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 BICC1Q9H694 974 aaKnown RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 DDX19AQ9NUU7 478 aaKnown RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 GNL3LQ9NVN8 582 aaKnown RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 NARFQ9UHQ1 456 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 FAN1Q9Y2M0 1017 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 SUGT1Q9Y2Z0 365 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 TLL2Q9Y6L7 1015 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 COL2A1P02458 1487 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 SALL1Q9NSC2 1324 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 ANKRD18BA2A2Z9 1011 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 CCDC151A5D8V7 595 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 BECN2A8MW95 431 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 IGKV5-2P06315 115 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 SSR1P43307 286 aaKnown RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 AK2P54819 239 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 FKBP1AP62942 108 aaKnown RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 PPP2R5BQ15173 497 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 CCDC178Q5BJE1 867 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 NBPF10Q6P3W6 841 aaKnown RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 FAM173BQ6P4H8 233 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 C11orf57Q6ZUT1 292 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 RSRC2Q7L4I2 434 aaKnown RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 G2E3Q7L622 706 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 NBPF11Q86T75 865 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 LDHDQ86WU2 507 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 VWA5B2Q8N398 1253 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 NBPF15Q8N660 670 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 STAG1Q8WVM7 1258 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 BORCS6Q96GS4 357 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 HAUS7Q99871 368 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 FAM107BQ9H098 131 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 OSBPL5Q9H0X9 879 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 SH2B1Q9NRF2 756 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 LIMCH1Q9UPQ0 1083 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 RTCBQ9Y3I0 505 aaKnown RBP4.54□□□□□ -1.68
CNGA1-201ENST00000358519 PDE4DIPQ5VU43 2346 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 NID2Q14112 1375 aa4.54□□□□□ -1.68
CNGA1-201ENST00000358519 LOC102724428A0A0B4J2F2 783 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 RASSF10A6NK89 507 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 PHACTR2O75167 634 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 PAX7P23759 505 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 CHMLP26374 656 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ELF1P32519 619 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 KCNJ6P48051 423 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 SIK1P57059 783 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 FOXO4P98177 505 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 SCRN1Q12765 414 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 NBPF9Q3BBW0 867 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 VPS53Q5VIR6 699 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 JAKMIP3Q5VZ66 844 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 USPL1Q5W0Q7 1092 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ATL3Q6DD88 541 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 CC2D2BQ6DHV5 1058 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ARMCX5Q6P1M9 558 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 CPLX2Q6PUV4 134 aaKnown RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 RUFY3Q7L099 469 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 HDXQ7Z353 690 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 CNNM3Q8NE01 707 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 CTCFLQ8NI51 663 aaPredicted RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 RABGGTAQ92696 567 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 DSCC1Q9BVC3 393 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 UTP14AQ9BVJ6 771 aaKnown RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 SLC24A3Q9HC58 644 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 A1CFQ9NQ94 594 aaKnown RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 IMPACTQ9P2X3 320 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ABT1Q9ULW3 272 aaKnown RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 MYH15Q9Y2K3 1946 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ELL2O00472 640 aaPredicted RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 EIF3JO75822 258 aaKnown RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ZIC2O95409 532 aaPredicted RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 KCNA3P22001 575 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 SFPQP23246 707 aaKnown RBP eCLIP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ARID4AP29374 1257 aaPredicted RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 HSPA4P34932 840 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 RFC4P35249 363 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 TXLNAP40222 546 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 SETQ01105 290 aaPredicted RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 DGKZQ13574 1117 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 UBE4AQ14139 1066 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 NEDD9Q14511 834 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 BRD3Q15059 726 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ALX1Q15699 326 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ZKSCAN8Q15776 578 aaPredicted RBP4.53□□□□□ -1.68
CNGA1-201ENST00000358519 TSHZ3Q63HK5 1081 aa4.53□□□□□ -1.68
CNGA1-201ENST00000358519 ISM2Q6H9L7 571 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms