RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TAGAPQ8N103 731 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 FAM71BQ8TC56 605 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 PPP1R14AQ96A00 147 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 GGA1Q9UJY5 639 aa10.71□□□□□ -0.69
CHD3-202ENST00000358181 ANXA13P27216 316 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 ADPGKQ9BRR6 497 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 ZCWPW1Q9H0M4 648 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 KCNA6P17658 529 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 VAV2P52735 878 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 ACCSLQ4AC99 568 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 CEP128Q6ZU80 1094 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 G2E3Q7L622 706 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 ADAT2Q7Z6V5 191 aaKnown RBP10.71□□□□□ -0.7
CHD3-202ENST00000358181 NLRX1Q86UT6 975 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 CCDC13Q8IYE1 715 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 MAGEB10Q96LZ2 347 aaPredicted RBP10.71□□□□□ -0.7
CHD3-202ENST00000358181 WDR7Q9Y4E6 1490 aa10.71□□□□□ -0.7
CHD3-202ENST00000358181 AGRPO00253 132 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 FMNL1O95466 1100 aaPredicted RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 TIMM10P62072 90 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 USP48Q86UV5 1035 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 ZSCAN30Q86W11 494 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 FAM76AQ8TAV0 307 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 RAB20Q9NX57 234 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 AFF4Q9UHB7 1163 aaKnown RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 G3BP2Q9UN86 482 aaKnown RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 MYL1P05976 194 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 CAPZA2P47755 286 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 OCRLQ01968 901 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 DLGAP5Q15398 846 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 MRPL50Q8N5N7 158 aaKnown RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 SMAD5Q99717 465 aaKnown RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 SYCP2Q9BX26 1530 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 RIMS2Q9UQ26 1411 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 UBE3AQ05086 875 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 TRIML1Q8N9V2 468 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 A6NJR5 290 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 SERPIND1P05546 499 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 CAPRIN1Q14444 709 aaKnown RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 NONOQ15233 471 aaKnown RBP eCLIP10.7□□□□□ -0.7
CHD3-202ENST00000358181 B4GALNT2Q8NHY0 566 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 AKAP4Q5JQC9 854 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 NUDCD3Q8IVD9 361 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 DNAJC25Q9H1X3 360 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 NCOA1Q15788 1441 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 FRMPD2Q68DX3 1309 aaPredicted RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 NPHP3Q7Z494 1330 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 BRD1O95696 1058 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 DLATP10515 647 aaKnown RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 LMNB1P20700 586 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 IRX4P78413 519 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 DNM1Q05193 864 aaKnown RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 MCMDC2Q4G0Z9 681 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 TMTC2Q8N394 836 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 EYA1Q99502 592 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 POLKQ9UBT6 870 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 THRAP3Q9Y2W1 955 aaKnown RBP10.7□□□□□ -0.7
CHD3-202ENST00000358181 CUL7Q14999 1698 aa10.7□□□□□ -0.7
CHD3-202ENST00000358181 DAB2P98082 770 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 MUM1Q2TAK8 710 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 KRT80Q6KB66 452 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 TTC6Q86TZ1 520 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 FBXL13Q8NEE6 735 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 ASXL2Q76L83 1435 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 EBAG9O00559 213 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 ZSCAN9O15535 394 aaPredicted RBP10.69□□□□□ -0.7
CHD3-202ENST00000358181 PIK3CAP42336 1068 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 OTUD6AQ7L8S5 288 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 NBPF11Q86T75 865 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 SH3KBP1Q96B97 665 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 ANKRD2Q9GZV1 360 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 AS3MTQ9HBK9 375 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 DKC1O60832 514 aaKnown RBP eCLIP10.69□□□□□ -0.71e-26■■■■■ 66.1
CHD3-202ENST00000358181 SEC24BO95487 1268 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 PTPREP23469 700 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 EEF1B2P24534 225 aaKnown RBP10.69□□□□□ -0.7
CHD3-202ENST00000358181 CCDC186Q7Z3E2 898 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 ZNF75DP51815 510 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 FAM182BQ5T319 152 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 ZBTB8OSQ8IWT0 167 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 RNF10Q8N5U6 811 aaKnown RBP10.69□□□□□ -0.7
CHD3-202ENST00000358181 CEP104O60308 925 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 GCP02774 474 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 A1BGP04217 495 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 RLBP1P12271 317 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 BAG6P46379 1132 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 PDE1AP54750 535 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 SKOR1P84550 965 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 NLRP7Q8WX94 980 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 CAPN10Q9HC96 672 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 ABCA10Q8WWZ4 1543 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
CHD3-202ENST00000358181 EVI5O60447 810 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 KRT10P13645 584 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 ANKRD20A3Q5VUR7 823 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 RFX6Q8HWS3 928 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 CCNYQ8ND76 341 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 RTEL1Q9NZ71 1219 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 ABCC11Q96J66 1382 aa10.69□□□□□ -0.7
CHD3-202ENST00000358181 hCG_1642624A0A1W2PR95 340 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms