RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 HDAC9Q9UKV0 1011 aa16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 TTF2Q9UNY4 1162 aaKnown RBP16.31■□□□□ 0.2
NIPAL3-203ENST00000358028 hCG_1642624A0A1W2PR95 340 aa16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 TSPY2A6NKD2 308 aa16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 USP5P45974 858 aa16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 NT5C2P49902 561 aa16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 ISM2Q6H9L7 571 aa16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 FILIP1Q7Z7B0 1213 aa16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 ANKRD7Q92527 254 aa16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 CCDC94Q9BW85 323 aaPredicted RBP16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 MKRN1Q9UHC7 482 aaKnown RBP16.3■□□□□ 0.2
NIPAL3-203ENST00000358028 ROBO3Q96MS0 1386 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 FAM205CA6NFA0 338 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 TRIM75PA6NK02 468 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 CBFA2T2O43439 604 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 ATP2B1P20020 1258 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 NBPF9Q3BBW0 867 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 C12orf60Q5U649 245 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 CEP135Q66GS9 1140 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 NYAP1Q6ZVC0 841 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 SRBD1Q8N5C6 995 aaKnown RBP16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 SH3RF3Q8TEJ3 882 aaPredicted RBP16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 XPO4Q9C0E2 1151 aaKnown RBP16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 GGA3Q9NZ52 723 aa16.29■□□□□ 0.2
NIPAL3-203ENST00000358028 WNT10BO00744 389 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 SMC2O95347 1197 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 BAG3O95817 575 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 TUBB4AP04350 444 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 MDM2Q00987 491 aaPredicted RBP16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 MYL5Q02045 173 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 CCDC112Q8NEF3 446 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 IFNKQ9P0W0 207 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 PGAP2Q9UHJ9 254 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 PCDHA5Q9Y5H7 936 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 LDHCP07864 332 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 PPP4CP60510 307 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 ARID5BQ14865 1188 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 PTPN14Q15678 1187 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 CFAP100Q494V2 611 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 EARS2Q5JPH6 523 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 RCSD1Q6JBY9 416 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 FOXP4Q8IVH2 680 aaPredicted RBP16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 CCAR2Q8N163 923 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 ZC3H15Q8WU90 426 aaKnown RBP16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 ZBED3Q96IU2 234 aaPredicted RBP16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 SERTAD1Q9UHV2 236 aa16.28■□□□□ 0.2
NIPAL3-203ENST00000358028 CDK5RAP2Q96SN8 1893 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 FOXN1O15353 648 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 POLR2DO15514 142 aaKnown RBP16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 BMP15O95972 392 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 TFAP4Q01664 338 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 FMR1Q06787 632 aaKnown RBP eCLIP16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 POSTNQ15063 836 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 DIXDC1Q155Q3 683 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 NPY5RQ15761 445 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 SLC4A8Q2Y0W8 1093 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 ANGEL2Q5VTE6 544 aaKnown RBP16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 CSRNP2Q9H175 543 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 KAT14Q9H8E8 782 aa16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 SCAF8Q9UPN6 1271 aaKnown RBP16.27■□□□□ 0.2
NIPAL3-203ENST00000358028 SCG2P13521 617 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 KIF5BP33176 963 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 CRKP46108 304 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 MMP14P50281 582 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 RBM5P52756 815 aaKnown RBP eCLIP16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 FANCCQ00597 558 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 DLGAP5Q15398 846 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 DGKHQ86XP1 1220 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 AMOTL1Q8IY63 956 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 ANKS1AQ92625 1134 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 DYNLL2Q96FJ2 89 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 GLIS2Q9BZE0 524 aaPredicted RBP16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 SUGT1Q9Y2Z0 365 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 TRAF5O00463 557 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 CCP110O43303 1012 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 ACTN4O43707 911 aaKnown RBP16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 PRR29P0C7W0 189 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 CCDC178Q5BJE1 867 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 KANK3Q6NY19 840 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 DLK2Q6UY11 383 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 TMC6Q7Z403 805 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 MTMR14Q8NCE2 650 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 PRMT6Q96LA8 375 aaPredicted RBP16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 HSD3B7Q9H2F3 369 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 MAN1B1Q9UKM7 699 aa16.26■□□□□ 0.19
NIPAL3-203ENST00000358028 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
NIPAL3-203ENST00000358028 ADM5C9JUS6 153 aa16.25■□□□□ 0.19
NIPAL3-203ENST00000358028 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
NIPAL3-203ENST00000358028 NT5DC1Q5TFE4 455 aa16.25■□□□□ 0.19
NIPAL3-203ENST00000358028 CERS3Q8IU89 383 aa16.25■□□□□ 0.19
NIPAL3-203ENST00000358028 TRIML1Q8N9V2 468 aa16.25■□□□□ 0.19
NIPAL3-203ENST00000358028 TSC1Q92574 1164 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms