RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 CETN3O15182 167 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 IFNAR1P17181 557 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 IFT88Q13099 833 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 TNIP1Q15025 636 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CSGALNACT2Q8N6G5 542 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CATSPER1Q8NEC5 780 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ALKBH8Q96BT7 664 aaKnown RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 SYTL4Q96C24 671 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 PAGR1Q9BTK6 254 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CCSER1Q9C0I3 900 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 LRP2BPQ9P2M1 347 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ADCY2Q08462 1091 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ADRM1Q16186 407 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 SLC30A9Q6PML9 568 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 RIBC1Q8N443 379 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 SLC26A6Q9BXS9 759 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 SND1Q7KZF4 910 aaKnown RBP eCLIP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CRNKL1Q9BZJ0 848 aaKnown RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 SMAPO00193 183 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 TDRD12Q587J7 1177 aaKnown RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 SCLT1Q96NL6 688 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 PFDN4Q9NQP4 134 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 TNFRSF8P28908 595 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ICA1Q05084 483 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 EMC10Q5UCC4 262 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 PRPF38AQ8NAV1 312 aaKnown RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 BAIAP2L1Q9UHR4 511 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 UNC13BO14795 1591 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 BPIFB4P59827 614 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 DPCR1Q3MIW9 517 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 METTL24Q5JXM2 366 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 TET3O43151 1660 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 hCG_1984214I3L0E3 225 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ECM2O94769 699 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CCT2P78371 535 aaKnown RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 LRRC23Q53EV4 343 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC63Q8NA47 563 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CAVIN3Q969G5 261 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 DYTNA2CJ06 578 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 RHOXF2BP0C7M4 288 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 PFKFB1P16118 471 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 MCF2L2Q86YR7 1114 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 NELFBQ8WX92 580 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 RHOXF2Q9BQY4 288 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 TANGO6Q9C0B7 1094 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ANKIB1Q9P2G1 1089 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ABCC1P33527 1531 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 NR1D1P20393 614 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 MED23Q9ULK4 1368 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 DDAH1O94760 285 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 KDRP35968 1356 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 GNGT1P63211 74 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 NLRP1Q9C000 1473 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 O00370 1275 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ASAP2O43150 1006 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 TBC1D8O95759 1140 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 SCP2P22307 547 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 RFX1P22670 979 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CCND1P24385 295 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 LZTFL1Q9NQ48 299 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ADD3Q9UEY8 706 aaKnown RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 PNMA6EA0A0J9YXQ4 647 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 IDH1O75874 414 aaKnown RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 SNX16P57768 344 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ALCAMQ13740 583 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 GRIPAP1Q4V328 841 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 MREGQ8N565 214 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 FMO2Q99518 471 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 C6orf50Q9HD87 102 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 VIMP08670 466 aaKnown RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ELF1P32519 619 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 PHACTR2O75167 634 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 TNNI3KQ59H18 835 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC62Q6P9F0 684 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 PI4K2BQ8TCG2 481 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 ABCB6Q9NP58 842 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 FPGT-TNNI3KV9GXZ4 949 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 PFASO15067 1338 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 TRAPPC11Q7Z392 1133 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 CD302Q8IX05 232 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 JPH2Q9BR39 696 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-204ENST00000358025 NT5C3AQ9H0P0 336 aa4.53□□□□□ -1.68
SYNE2-204ENST00000358025 IL9RQ01113 521 aa4.53□□□□□ -1.69
SYNE2-204ENST00000358025 TTC25Q96NG3 672 aa4.53□□□□□ -1.69
SYNE2-204ENST00000358025 WDR70Q9NW82 654 aa4.53□□□□□ -1.69
SYNE2-204ENST00000358025 POGZQ7Z3K3 1410 aa4.53□□□□□ -1.69
SYNE2-204ENST00000358025 ARHGEF40Q8TER5 1519 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 KDM3AQ9Y4C1 1321 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 C21orf2O43822 256 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ZNF444Q8N0Y2 327 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 SPATA4Q8NEY3 305 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 OLFM3Q96PB7 478 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 UBE4BO95155 1302 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 SMARCA1P28370 1054 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 DZIP3Q86Y13 1208 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 CUL5Q93034 780 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 DHX58Q96C10 678 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 IKBKGQ9Y6K9 419 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 EYA2O00167 538 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 AGGF1Q8N302 714 aaeCLIP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms