RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 BMP15O95972 392 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 FMR1Q06787 632 aaKnown RBP eCLIP11.16□□□□□ -0.624e-6■■■□□ 16.3
RNF40-202ENST00000357890 USP49Q70CQ1 688 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 HDAC6Q9UBN7 1215 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.16□□□□□ -0.62
RNF40-202ENST00000357890 SAR1BQ9Y6B6 198 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 TSPY2A6NKD2 308 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 UBA7P41226 1012 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 PIK3AP1Q6ZUJ8 805 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 OXER1Q8TDS5 423 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 EHD4Q9H223 541 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 FOXP1Q9H334 677 aaPredicted RBP11.15□□□□□ -0.62
RNF40-202ENST00000357890 TEX33O43247 280 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 PLCD1P51178 756 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 GUCY2FP51841 1108 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 PPP2R5BQ15173 497 aa11.15□□□□□ -0.62
RNF40-202ENST00000357890 TACO1Q9BSH4 297 aaKnown RBP11.15□□□□□ -0.62
RNF40-202ENST00000357890 AFDNP55196 1824 aaKnown RBP11.15□□□□□ -0.62
RNF40-202ENST00000357890 TNKSO95271 1327 aa11.15□□□□□ -0.63
RNF40-202ENST00000357890 STK36Q9NRP7 1315 aa11.15□□□□□ -0.63
RNF40-202ENST00000357890 LRRIQ3A6PVS8 624 aaPredicted RBP11.15□□□□□ -0.63
RNF40-202ENST00000357890 PTPREP23469 700 aa11.15□□□□□ -0.63
RNF40-202ENST00000357890 STAT6P42226 847 aa11.15□□□□□ -0.63
RNF40-202ENST00000357890 ARHGAP25P42331 645 aa11.15□□□□□ -0.63
RNF40-202ENST00000357890 PPARAQ07869 468 aa11.15□□□□□ -0.63
RNF40-202ENST00000357890 FOXP4Q8IVH2 680 aaPredicted RBP11.15□□□□□ -0.63
RNF40-202ENST00000357890 AMOTL1Q8IY63 956 aa11.15□□□□□ -0.63
RNF40-202ENST00000357890 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.63
RNF40-202ENST00000357890 RSRC1Q96IZ7 334 aaKnown RBP11.15□□□□□ -0.63
RNF40-202ENST00000357890 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.63
RNF40-202ENST00000357890 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.15□□□□□ -0.63
RNF40-202ENST00000357890 CCDC194A0A1B0GVG4 234 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 TUBB4BP68371 445 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 PPFIA1Q13136 1202 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 SPATA1Q5VX52 437 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 CPLX4Q7Z7G2 160 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 LCORLQ8N3X6 602 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 CCDC87Q9NVE4 849 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 SCN11AQ9UI33 1791 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 EIF4E1BA6NMX2 242 aaKnown RBP11.14□□□□□ -0.63
RNF40-202ENST00000357890 FOXP2O15409 715 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 KRT86O43790 486 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 BUB1BO60566 1050 aaPredicted RBP11.14□□□□□ -0.63
RNF40-202ENST00000357890 KCNJ6P48051 423 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 SLC7A5Q01650 507 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 SPAG1Q07617 926 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 TRIML1Q8N9V2 468 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 TANGO6Q9C0B7 1094 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 CPSF2Q9P2I0 782 aaKnown RBP11.14□□□□□ -0.63
RNF40-202ENST00000357890 C5P01031 1676 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 PPP1R12BO60237 982 aaPredicted RBP11.14□□□□□ -0.63
RNF40-202ENST00000357890 CALM1P0DP23 149 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 CALM2P0DP24 149 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 CALM3P0DP25 149 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 CDC25AP30304 524 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 C2orf54Q08AI8 447 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 PTPAQ15257 358 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 TTC38Q5R3I4 469 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 PRPF38AQ8NAV1 312 aaKnown RBP11.14□□□□□ -0.63
RNF40-202ENST00000357890 ACSBG1Q96GR2 724 aa11.14□□□□□ -0.63
RNF40-202ENST00000357890 IFFO1Q0D2I5 559 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 CRACR2BQ8N4Y2 399 aaPredicted RBP11.13□□□□□ -0.63
RNF40-202ENST00000357890 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
RNF40-202ENST00000357890 JAG2Q9Y219 1238 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 LUC7L2Q9Y383 392 aaKnown RBP11.13□□□□□ -0.63
RNF40-202ENST00000357890 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 FMNL3Q8IVF7 1028 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 JAKMIP2Q96AA8 810 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 L1RE1Q9UN81 338 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 SRPRBQ9Y5M8 271 aaKnown RBP11.13□□□□□ -0.63
RNF40-202ENST00000357890 RGPD5Q99666 1765 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 SMIM23A6NLE4 172 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 AKR1B10O60218 316 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 USO1O60763 962 aaKnown RBP11.13□□□□□ -0.63
RNF40-202ENST00000357890 ERCC5P28715 1186 aaPredicted RBP11.13□□□□□ -0.63
RNF40-202ENST00000357890 VAV2P52735 878 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 KIF5AQ12840 1032 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 PTGDRQ13258 359 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 TDRD12Q587J7 1177 aaKnown RBP11.13□□□□□ -0.63
RNF40-202ENST00000357890 CCDC178Q5BJE1 867 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 SUSD4Q5VX71 490 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 CYP26C1Q6V0L0 522 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 TC2NQ8N9U0 490 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 STAG1Q8WVM7 1258 aa11.13□□□□□ -0.63
RNF40-202ENST00000357890 RAD21O60216 631 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 ERCC3P19447 782 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 MTIF2P46199 727 aaKnown RBP11.12□□□□□ -0.63
RNF40-202ENST00000357890 DDB1Q16531 1140 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 TMTC1Q8IUR5 882 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 SELENOOQ9BVL4 669 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 RBM28Q9NW13 759 aaKnown RBP11.12□□□□□ -0.63
RNF40-202ENST00000357890 HPSEQ9Y251 543 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 ADGRG1Q9Y653 693 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 COL5A2P05997 1499 aaPredicted RBP11.12□□□□□ -0.63
RNF40-202ENST00000357890 CHRNDQ07001 517 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 PAK1Q13153 545 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 SF3B2Q13435 895 aaKnown RBP11.12□□□□□ -0.63
RNF40-202ENST00000357890 CEP89Q96ST8 783 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 ANKZF1Q9H8Y5 726 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms