RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TAB2Q9NYJ8 693 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 ABCF2Q9UG63 623 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 CAPN11Q9UMQ6 739 aa19.92■□□□□ 0.78
RTN4-204ENST00000357732 NIP7Q9Y221 180 aaKnown RBP eCLIP19.92■□□□□ 0.78
RTN4-204ENST00000357732 TARSL2A2RTX5 802 aaKnown RBP19.91■□□□□ 0.78
RTN4-204ENST00000357732 LMAN1P49257 510 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 SRBD1Q8N5C6 995 aaKnown RBP19.91■□□□□ 0.78
RTN4-204ENST00000357732 BLZF1Q9H2G9 400 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 MAGEF1Q9HAY2 307 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 LUC7L2Q9Y383 392 aaKnown RBP19.91■□□□□ 0.78
RTN4-204ENST00000357732 WTIPA6NIX2 430 aaPredicted RBP19.91■□□□□ 0.78
RTN4-204ENST00000357732 CKAP4Q07065 602 aaKnown RBP19.91■□□□□ 0.78
RTN4-204ENST00000357732 CAVIN4Q5BKX8 364 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 CTR9Q6PD62 1173 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 PIK3AP1Q6ZUJ8 805 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 MB21D1Q8N884 522 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 IQCDQ96DY2 449 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 ACSBG1Q96GR2 724 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 NUP58Q9BVL2 599 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 TMEM51Q9NW97 253 aa19.91■□□□□ 0.78
RTN4-204ENST00000357732 COL4A1P02462 1669 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 PARP1P09874 1014 aaKnown RBP19.9■□□□□ 0.78
RTN4-204ENST00000357732 PPP1R2P41236 205 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 STAT6P42226 847 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 SLF1Q9BQI6 1058 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 DISC1Q9NRI5 854 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 VPS18Q9P253 973 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 DOT1LQ8TEK3 1739 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 LAD1O00515 517 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 PRCPP42785 496 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 AARSP49588 968 aaKnown RBP eCLIP19.9■□□□□ 0.785e-8■■■□□ 16.6
RTN4-204ENST00000357732 DNM2P50570 870 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 MEA1Q16626 185 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 PAPD7Q5XG87 772 aaKnown RBP19.9■□□□□ 0.78
RTN4-204ENST00000357732 GALNT17Q6IS24 598 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 C4orf32Q8N8J7 132 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 ZNF507Q8TCN5 953 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 CUEDC2Q9H467 287 aa19.9■□□□□ 0.78
RTN4-204ENST00000357732 BAZ2AQ9UIF9 1905 aaKnown RBP19.89■□□□□ 0.77
RTN4-204ENST00000357732 COL14A1Q05707 1796 aaKnown RBP19.89■□□□□ 0.77
RTN4-204ENST00000357732 RHOXF2BP0C7M4 288 aa19.89■□□□□ 0.77
RTN4-204ENST00000357732 GYG1P46976 350 aa19.89■□□□□ 0.77
RTN4-204ENST00000357732 IL17AQ16552 155 aa19.89■□□□□ 0.77
RTN4-204ENST00000357732 RHOXF2Q9BQY4 288 aa19.89■□□□□ 0.77
RTN4-204ENST00000357732 ATP8A2Q9NTI2 1148 aa19.89■□□□□ 0.77
RTN4-204ENST00000357732 hCG_1642624A0A1W2PR95 340 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 ANO9A1A5B4 782 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 PSMA7O14818 248 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 MCM7P33993 719 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 ITPK1Q13572 414 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 SBK1Q52WX2 424 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 CCDC170Q8IYT3 715 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 ARPP21Q9UBL0 812 aaPredicted RBP19.88■□□□□ 0.77
RTN4-204ENST00000357732 COL1A1P02452 1464 aaPredicted RBP19.88■□□□□ 0.77
RTN4-204ENST00000357732 CYP2D7A0A087X1C5 515 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 RNF225M0QZC1 329 aaPredicted RBP19.88■□□□□ 0.77
RTN4-204ENST00000357732 ZBTB22O15209 634 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 KRT86O43790 486 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 USP14P54578 494 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 IRF2BP1Q8IU81 584 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 BLIDQ8IZY5 108 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 STAMQ92783 540 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 MAGEC2Q9UBF1 373 aaPredicted RBP19.88■□□□□ 0.77
RTN4-204ENST00000357732 MKRN1Q9UHC7 482 aaKnown RBP19.88■□□□□ 0.77
RTN4-204ENST00000357732 REXO2Q9Y3B8 237 aaKnown RBP19.88■□□□□ 0.77
RTN4-204ENST00000357732 SAR1BQ9Y6B6 198 aa19.88■□□□□ 0.77
RTN4-204ENST00000357732 WNK3Q9BYP7 1800 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 TTC26A0AVF1 554 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 RHOBTB3O94955 611 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 CAPN2P17655 700 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 CYLC1P35663 651 aaPredicted RBP19.87■□□□□ 0.77
RTN4-204ENST00000357732 DHTKD1Q96HY7 919 aaPredicted RBP19.87■□□□□ 0.77
RTN4-204ENST00000357732 CCSER1Q9C0I3 900 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 LOC102724428A0A0B4J2F2 783 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 SIK1P57059 783 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 DYNLL1P63167 89 aaKnown RBP19.87■□□□□ 0.77
RTN4-204ENST00000357732 NOM1Q5C9Z4 860 aaKnown RBP19.87■□□□□ 0.77
RTN4-204ENST00000357732 IQCEQ6IPM2 695 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 RUBCNQ92622 972 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 CRNKL1Q9BZJ0 848 aaKnown RBP19.87■□□□□ 0.77
RTN4-204ENST00000357732 PCDHA4Q9UN74 947 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 MAST2Q6P0Q8 1798 aa19.87■□□□□ 0.77
RTN4-204ENST00000357732 CDC25AP30304 524 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 PRPHP41219 470 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 CDK17Q00537 523 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 DTHD1Q6ZMT9 781 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 NOA1Q8NC60 698 aaKnown RBP19.86■□□□□ 0.77
RTN4-204ENST00000357732 DAGLBQ8NCG7 672 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 GIMAP8Q8ND71 665 aaPredicted RBP19.86■□□□□ 0.77
RTN4-204ENST00000357732 CHP1Q99653 195 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 BSDC1Q9NW68 430 aaPredicted RBP19.86■□□□□ 0.77
RTN4-204ENST00000357732 USP17L12C9JPN9 530 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 USP17L21D6R901 530 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 IPO7O95373 1038 aaKnown RBP19.86■□□□□ 0.77
RTN4-204ENST00000357732 ABL1P00519 1130 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 SRGNP10124 158 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 GNAQP50148 359 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 CCDC178Q5BJE1 867 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 FIGNQ5HY92 759 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 ANKRD18AQ8IVF6 992 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms