RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 SPTLC2O15270 562 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 SMC2O95347 1197 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 FANCCQ00597 558 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 MIGA2Q7L4E1 593 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 CLEC10AQ8IUN9 316 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 MTMR14Q8NCE2 650 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 FBXO18Q8NFZ0 1043 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 NUP133Q8WUM0 1156 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 ZBED3Q96IU2 234 aaPredicted RBP14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 TRIM34Q9BYJ4 488 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 DNAJC18Q9H819 358 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 IL17RBQ9NRM6 502 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 CALCOCO1Q9P1Z2 691 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 ORC3Q9UBD5 711 aaPredicted RBP14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 HACL1Q9UJ83 578 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 CNTNAP1P78357 1384 aa14.44□□□□□ -0.1
RTFDC1-202ENST00000357348 FAM237AA0A1B0GTK4 181 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 ZNF202O95125 648 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 GUCY1B3Q02153 619 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 GABPAQ06546 454 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 STK38Q15208 465 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 IFIT1BQ5T764 474 aaKnown RBP14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 MYSM1Q5VVJ2 828 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 PRAMEF18Q5VWM3 479 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 ST7Q9NRC1 585 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 PI4KBQ9UBF8 816 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 STX8Q9UNK0 236 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 SLC12A7Q9Y666 1083 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 WDR19Q8NEZ3 1342 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 PCP11498 1178 aaKnown RBP14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 AKR1B1P15121 316 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 ANGEL2Q5VTE6 544 aaKnown RBP14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 APOA5Q6Q788 366 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 REXO1L1PQ8IX06 675 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 DHX36Q9H2U1 1008 aaKnown RBP14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 HPS5Q9UPZ3 1129 aa14.43□□□□□ -0.1
RTFDC1-202ENST00000357348 GRIN3BO60391 1043 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 ENTPD3O75355 529 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 TADA3O75528 432 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 GDF11O95390 407 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 SHMT1P34896 483 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 HIRAP54198 1017 aaPredicted RBP14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 SEC23AQ15436 765 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 ARHGAP29Q52LW3 1261 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 CMTR1Q8N1G2 835 aaKnown RBP14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 CCDC82Q8N4S0 544 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 ZNF287Q9HBT7 754 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 TMEM51Q9NW97 253 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 TULP2O00295 520 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 ZBTB43O43298 467 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 TPM1P09493 284 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 RASA3Q14644 834 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 ZRSR1Q15695 479 aaKnown RBP14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 FAM151AQ8WW52 585 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 DNAI1Q9UI46 699 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 HPSEQ9Y251 543 aa14.42□□□□□ -0.1
RTFDC1-202ENST00000357348 BAZ2BQ9UIF8 2168 aaKnown RBP14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 EFCAB8A8MWE9 144 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 FANCGO15287 622 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 CBFA2T2O43439 604 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 PFKFB1P16118 471 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 LMOD1P29536 600 aaPredicted RBP14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 LIFRP42702 1097 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 METAP2P50579 478 aaKnown RBP eCLIP14.41□□□□□ -0.13e-6■■□□□ 14.5
RTFDC1-202ENST00000357348 SF3A1Q15459 793 aaKnown RBP14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 DLK2Q6UY11 383 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 C8orf76Q96K31 380 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 ARGLU1Q9NWB6 273 aaPredicted RBP14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 DHX16O60231 1041 aaKnown RBP14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 CDC27P30260 824 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 ATP2B2Q01814 1243 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 KIF23Q02241 960 aaPredicted RBP14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 ANO1Q5XXA6 986 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 SYNE3Q6ZMZ3 975 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 RASGRP2Q7LDG7 609 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 CEP95Q96GE4 821 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 GGA3Q9NZ52 723 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 FZD1Q9UP38 647 aa14.41□□□□□ -0.1
RTFDC1-202ENST00000357348 GOLGA8AA7E2F4 631 aa14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 SLC20A2Q08357 652 aa14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 SLC39A14Q15043 492 aa14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 RCSD1Q6JBY9 416 aa14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 SGMS1Q86VZ5 419 aa14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 TMEM139Q8IV31 216 aa14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 VSTM4Q8IW00 320 aa14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 ZNF654Q8IZM8 581 aa14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 UBXN4Q92575 508 aa14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.4□□□□□ -0.1
RTFDC1-202ENST00000357348 CPLX1O14810 134 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 RRP1BQ14684 758 aaKnown RBP14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 CERKLQ49MI3 558 aaPredicted RBP14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 OTUD7BQ6GQQ9 843 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 TMCO3Q6UWJ1 677 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 ELOA2Q8IYF1 753 aaPredicted RBP14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 SWAP70Q9UH65 585 aa14.39□□□□□ -0.11
RTFDC1-202ENST00000357348 ATRNL1Q5VV63 1379 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms