RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 DNAJC14Q6Y2X3 702 aaPredicted RBP17.53■□□□□ 0.4
RTN3-205ENST00000356000 MYLK4Q86YV6 388 aaPredicted RBP17.53■□□□□ 0.4
RTN3-205ENST00000356000 APLFQ8IW19 511 aaPredicted RBP17.53■□□□□ 0.4
RTN3-205ENST00000356000 NDST4Q9H3R1 872 aa17.53■□□□□ 0.4
RTN3-205ENST00000356000 HAUS4Q9H6D7 363 aa17.53■□□□□ 0.4
RTN3-205ENST00000356000 PPANQ9NQ55 473 aaKnown RBP17.53■□□□□ 0.4
RTN3-205ENST00000356000 DMGDHQ9UI17 866 aaKnown RBP17.53■□□□□ 0.4
RTN3-205ENST00000356000 THSD7AQ9UPZ6 1657 aa17.53■□□□□ 0.4
RTN3-205ENST00000356000 GYPCP04921 128 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 POLR3DP05423 398 aaPredicted RBP17.52■□□□□ 0.4
RTN3-205ENST00000356000 ALADP13716 330 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 TNFRSF8P28908 595 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 TPP2P29144 1249 aaPredicted RBP17.52■□□□□ 0.4
RTN3-205ENST00000356000 FXR1P51114 621 aaKnown RBP eCLIP17.52■□□□□ 0.4
RTN3-205ENST00000356000 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 CACNA2D3Q8IZS8 1091 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 MLKLQ8NB16 471 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 CAGE1Q8TC20 777 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 AGAP11Q8TF27 550 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 MKL1Q969V6 931 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 MED15Q96RN5 788 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 SLF1Q9BQI6 1058 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 DACH1Q9UI36 760 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.52■□□□□ 0.4
RTN3-205ENST00000356000 TOPAZ1Q8N9V7 1692 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 BRWD3Q6RI45 1802 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 TAF5LO75529 589 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 FMNL1O95466 1100 aaPredicted RBP17.52■□□□□ 0.4
RTN3-205ENST00000356000 CUL3Q13618 768 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 QPCTQ16769 361 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 ARMC9Q7Z3E5 817 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 HDAC7Q8WUI4 952 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 ATP6V1G3Q96LB4 118 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 TRIM10Q9UDY6 481 aa17.52■□□□□ 0.4
RTN3-205ENST00000356000 HMGB1P1B2RPK0 211 aaPredicted RBP17.51■□□□□ 0.39
RTN3-205ENST00000356000 STXBP3O00186 592 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 TRAPPC3O43617 180 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 SLC39A14Q15043 492 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 SYNE3Q6ZMZ3 975 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
RTN3-205ENST00000356000 TRMT44Q8IYL2 757 aaKnown RBP17.51■□□□□ 0.39
RTN3-205ENST00000356000 TEX9Q8N6V9 391 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 LRRC2Q9BYS8 371 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 SH3TC1Q8TE82 1336 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 ITIH3Q06033 890 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 RRP12Q5JTH9 1297 aaKnown RBP17.51■□□□□ 0.39
RTN3-205ENST00000356000 PPP1R15BQ5SWA1 713 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 SHC4Q6S5L8 630 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 ELOA2Q8IYF1 753 aaPredicted RBP17.51■□□□□ 0.39
RTN3-205ENST00000356000 HINFPQ9BQA5 517 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 OSBPL1AQ9BXW6 950 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 ADD3Q9UEY8 706 aaKnown RBP17.51■□□□□ 0.39
RTN3-205ENST00000356000 REXO2Q9Y3B8 237 aaKnown RBP17.51■□□□□ 0.39
RTN3-205ENST00000356000 ITIH6Q6UXX5 1313 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 FDPSP14324 419 aaKnown RBP17.51■□□□□ 0.39
RTN3-205ENST00000356000 EZH2Q15910 746 aaKnown RBP17.51■□□□□ 0.39
RTN3-205ENST00000356000 NUGGCQ68CJ6 796 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 CCDC102BQ68D86 513 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 LRRC1Q9BTT6 524 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.51■□□□□ 0.394e-10■■■■□ 20.1
RTN3-205ENST00000356000 MAN1B1Q9UKM7 699 aa17.51■□□□□ 0.39
RTN3-205ENST00000356000 MYH8P13535 1937 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 A0A1B0GVG6 124 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 RASSF10A6NK89 507 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 ATP2C2O75185 946 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 MYL1P05976 194 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 ZNF268Q14587 947 aaPredicted RBP17.5■□□□□ 0.39
RTN3-205ENST00000356000 CFAP58Q5T655 872 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 ARFGAP2Q8N6H7 521 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 CCDC63Q8NA47 563 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 SLX1AQ9BQ83 275 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 ABHD10Q9NUJ1 306 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 GPR75-ASB3A0A0A6YYF3 556 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 DPPA5A6NC42 116 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 GSTA1P08263 222 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
RTN3-205ENST00000356000 MDM2Q00987 491 aaPredicted RBP17.5■□□□□ 0.39
RTN3-205ENST00000356000 LONRF3Q496Y0 759 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 ZNF572Q7Z3I7 529 aaPredicted RBP17.5■□□□□ 0.39
RTN3-205ENST00000356000 DTNBP1Q96EV8 351 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 BICD1Q96G01 975 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 ASB3Q9Y575 518 aa17.5■□□□□ 0.39
RTN3-205ENST00000356000 ZNF185O15231 689 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 NPTXRO95502 500 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 CNGA1P29973 690 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 ZMYM1Q5SVZ6 1142 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 TEKT4Q8WW24 435 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 C8orf76Q96K31 380 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 NCOA5Q9HCD5 579 aaKnown RBP17.49■□□□□ 0.39
RTN3-205ENST00000356000 KCNMB3Q9NPA1 279 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 WDR35Q9P2L0 1181 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 CCNG1P51959 295 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 SLC9C2Q5TAH2 1124 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 RBM17Q96I25 401 aaKnown RBP17.49■□□□□ 0.39
RTN3-205ENST00000356000 MOV10L1Q9BXT6 1211 aaKnown RBP17.49■□□□□ 0.39
RTN3-205ENST00000356000 AGXT2Q9BYV1 514 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 PANK4Q9NVE7 773 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 ANKIB1Q9P2G1 1089 aa17.49■□□□□ 0.39
RTN3-205ENST00000356000 PHRF1Q9P1Y6 1649 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms