RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 DUSP11O75319 330 aaKnown RBP19.21■□□□□ 0.67
DDX55-202ENST00000354291 SNAI1O95863 264 aaPredicted RBP19.21■□□□□ 0.67
DDX55-202ENST00000354291 MYOGP15173 224 aa19.21■□□□□ 0.67
DDX55-202ENST00000354291 GNASQ5JWF2 1037 aa19.21■□□□□ 0.67
DDX55-202ENST00000354291 VCPKMTQ9H867 229 aa19.21■□□□□ 0.67
DDX55-202ENST00000354291 SPC25Q9HBM1 224 aa19.21■□□□□ 0.67
DDX55-202ENST00000354291 TMX2Q9Y320 296 aa19.21■□□□□ 0.67
DDX55-202ENST00000354291 MYO5AQ9Y4I1 1855 aaKnown RBP19.21■□□□□ 0.67
DDX55-202ENST00000354291 ROBO3Q96MS0 1386 aa19.2■□□□□ 0.66
DDX55-202ENST00000354291 MAGEB6P1A0A0J9YX57 407 aa19.2■□□□□ 0.66
DDX55-202ENST00000354291 ERC2O15083 957 aa19.2■□□□□ 0.66
DDX55-202ENST00000354291 IPO8O15397 1037 aaKnown RBP19.2■□□□□ 0.66
DDX55-202ENST00000354291 FAM126BQ8IXS8 530 aa19.2■□□□□ 0.66
DDX55-202ENST00000354291 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
DDX55-202ENST00000354291 ANTXR1Q9H6X2 564 aa19.2■□□□□ 0.66
DDX55-202ENST00000354291 SH2D4AQ9H788 454 aa19.2■□□□□ 0.66
DDX55-202ENST00000354291 TLR7Q9NYK1 1049 aaKnown RBP19.2■□□□□ 0.66
DDX55-202ENST00000354291 DBNLQ9UJU6 430 aaKnown RBP19.2■□□□□ 0.66
DDX55-202ENST00000354291 MUC6Q6W4X9 2439 aa19.19■□□□□ 0.66
DDX55-202ENST00000354291 RFXAPO00287 272 aa19.19■□□□□ 0.66
DDX55-202ENST00000354291 WDR46O15213 610 aaKnown RBP19.19■□□□□ 0.66
DDX55-202ENST00000354291 RAD21O60216 631 aa19.19■□□□□ 0.66
DDX55-202ENST00000354291 SURF6O75683 361 aaKnown RBP19.19■□□□□ 0.66
DDX55-202ENST00000354291 SLC4A3P48751 1232 aa19.19■□□□□ 0.66
DDX55-202ENST00000354291 CCL23P55773 120 aa19.19■□□□□ 0.66
DDX55-202ENST00000354291 ICA1Q05084 483 aa19.19■□□□□ 0.66
DDX55-202ENST00000354291 ALYREFQ86V81 257 aaKnown RBP19.19■□□□□ 0.66
DDX55-202ENST00000354291 RIOK1Q9BRS2 568 aaKnown RBP19.19■□□□□ 0.66
DDX55-202ENST00000354291 ADAMTS5Q9UNA0 930 aa19.19■□□□□ 0.66
DDX55-202ENST00000354291 SLC4A7Q9Y6M7 1214 aa19.19■□□□□ 0.66
DDX55-202ENST00000354291 VWA5AO00534 786 aa19.18■□□□□ 0.66
DDX55-202ENST00000354291 CYP2D6P10635 497 aa19.18■□□□□ 0.66
DDX55-202ENST00000354291 AKR1B1P15121 316 aa19.18■□□□□ 0.66
DDX55-202ENST00000354291 ACVR2BQ13705 512 aa19.18■□□□□ 0.66
DDX55-202ENST00000354291 MSL3Q8N5Y2 521 aaKnown RBP19.18■□□□□ 0.66
DDX55-202ENST00000354291 DYNLL2Q96FJ2 89 aa19.18■□□□□ 0.66
DDX55-202ENST00000354291 CRNKL1Q9BZJ0 848 aaKnown RBP19.18■□□□□ 0.66
DDX55-202ENST00000354291 HIPK3Q9H422 1215 aa19.18■□□□□ 0.66
DDX55-202ENST00000354291 PRRC2BQ5JSZ5 2229 aaKnown RBP19.17■□□□□ 0.66
DDX55-202ENST00000354291 TRANK1O15050 2925 aa19.17■□□□□ 0.66
DDX55-202ENST00000354291 FAM86C2PA6NEL3 165 aa19.17■□□□□ 0.66
DDX55-202ENST00000354291 ZBBXA8MT70 800 aa19.17■□□□□ 0.66
DDX55-202ENST00000354291 GTPBP6O43824 516 aaPredicted RBP19.17■□□□□ 0.66
DDX55-202ENST00000354291 CST5P28325 142 aaPredicted RBP19.17■□□□□ 0.66
DDX55-202ENST00000354291 CERS4Q9HA82 394 aa19.17■□□□□ 0.66
DDX55-202ENST00000354291 UMODL1Q5DID0 1318 aa19.17■□□□□ 0.66
DDX55-202ENST00000354291 CD4P01730 458 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 COPB2P35606 906 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 GJA9P57773 515 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 CCDC144BQ3MJ40 725 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
DDX55-202ENST00000354291 MIER1Q8N108 512 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 SDR42E1Q8WUS8 393 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 ZNF214Q9UL59 606 aaPredicted RBP19.16■□□□□ 0.66
DDX55-202ENST00000354291 PPP1R9AQ9ULJ8 1098 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 PCDHA11Q9Y5I1 949 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 MTCH2Q9Y6C9 303 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 A0A0G2JMZ2 1700 aa19.16■□□□□ 0.66
DDX55-202ENST00000354291 ADCY6O43306 1168 aa19.15■□□□□ 0.66
DDX55-202ENST00000354291 TLL1O43897 1013 aa19.15■□□□□ 0.66
DDX55-202ENST00000354291 BCAR3O75815 825 aa19.15■□□□□ 0.66
DDX55-202ENST00000354291 MAMDC4Q6UXC1 1216 aa19.15■□□□□ 0.66
DDX55-202ENST00000354291 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.15■□□□□ 0.66
DDX55-202ENST00000354291 SWAP70Q9UH65 585 aa19.15■□□□□ 0.66
DDX55-202ENST00000354291 GPR37L1O60883 481 aa19.14■□□□□ 0.65
DDX55-202ENST00000354291 EEF2P13639 858 aaKnown RBP19.14■□□□□ 0.65
DDX55-202ENST00000354291 BEX3Q00994 111 aa19.14■□□□□ 0.65
DDX55-202ENST00000354291 POLA2Q14181 598 aa19.14■□□□□ 0.65
DDX55-202ENST00000354291 FAM83BQ5T0W9 1011 aa19.14■□□□□ 0.65
DDX55-202ENST00000354291 KRT40Q6A162 431 aa19.14■□□□□ 0.65
DDX55-202ENST00000354291 NOL8Q76FK4 1167 aaKnown RBP19.14■□□□□ 0.65
DDX55-202ENST00000354291 RPUSD2Q8IZ73 545 aaKnown RBP19.14■□□□□ 0.65
DDX55-202ENST00000354291 REPS2Q8NFH8 660 aa19.14■□□□□ 0.65
DDX55-202ENST00000354291 FRAT1Q92837 279 aaPredicted RBP19.14■□□□□ 0.65
DDX55-202ENST00000354291 KHSRPQ92945 711 aaKnown RBP eCLIP19.14■□□□□ 0.652e-6■■■■□ 20.7
DDX55-202ENST00000354291 EAF2Q96CJ1 260 aaPredicted RBP19.14■□□□□ 0.65
DDX55-202ENST00000354291 UPF3AQ9H1J1 476 aaKnown RBP19.14■□□□□ 0.65
DDX55-202ENST00000354291 DCP1AQ9NPI6 582 aaPredicted RBP19.14■□□□□ 0.65
DDX55-202ENST00000354291 COG5Q9UP83 839 aa19.14■□□□□ 0.65
DDX55-202ENST00000354291 TRIM27P14373 513 aa19.13■□□□□ 0.65
DDX55-202ENST00000354291 ATP2A2P16615 1042 aaKnown RBP19.13■□□□□ 0.65
DDX55-202ENST00000354291 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
DDX55-202ENST00000354291 SNRNP48Q6IEG0 339 aaKnown RBP19.13■□□□□ 0.65
DDX55-202ENST00000354291 TMED8Q6PL24 325 aaPredicted RBP19.13■□□□□ 0.65
DDX55-202ENST00000354291 CXCL17Q6UXB2 119 aa19.13■□□□□ 0.65
DDX55-202ENST00000354291 TRPV6Q9H1D0 765 aa19.13■□□□□ 0.65
DDX55-202ENST00000354291 ABHD16BQ9H3Z7 469 aa19.13■□□□□ 0.65
DDX55-202ENST00000354291 C11orf16Q9NQ32 467 aa19.13■□□□□ 0.65
DDX55-202ENST00000354291 TNNQ9UQP3 1299 aa19.13■□□□□ 0.65
DDX55-202ENST00000354291 RIPK3Q9Y572 518 aa19.13■□□□□ 0.65
DDX55-202ENST00000354291 HNRNPUQ00839 825 aaKnown RBP eCLIP19.12■□□□□ 0.65
DDX55-202ENST00000354291 TMEM67Q5HYA8 995 aa19.12■□□□□ 0.65
DDX55-202ENST00000354291 HLA-CQ95604 372 aa19.12■□□□□ 0.65
DDX55-202ENST00000354291 CLUAP1Q96AJ1 413 aa19.12■□□□□ 0.65
DDX55-202ENST00000354291 TEX13BQ9BXU2 312 aa19.12■□□□□ 0.65
DDX55-202ENST00000354291 GOPCQ9HD26 462 aa19.12■□□□□ 0.65
DDX55-202ENST00000354291 DNAJC25-GNG10A0A024R161 153 aa19.11■□□□□ 0.65
DDX55-202ENST00000354291 CA3P07451 260 aa19.11■□□□□ 0.65
DDX55-202ENST00000354291 ATP8B2P98198 1209 aa19.11■□□□□ 0.65
DDX55-202ENST00000354291 ITGA7Q13683 1181 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms