RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CRTAMO95727 393 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 SOX5P35711 763 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 EPHB1P54762 984 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 PIK3R6Q5UE93 754 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 NSMFQ6X4W1 530 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 NFXL1Q6ZNB6 911 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 C11orf96Q7Z7L8 435 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 CHPFQ8IZ52 775 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 TMEM145Q8NBT3 493 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 PARD3BQ8TEW8 1205 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 MCMBPQ9BTE3 642 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 ZNF180Q9UJW8 692 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 ADAMTS8Q9UP79 889 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 FAM50BQ9Y247 325 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 GPR55Q9Y2T6 319 aaPredicted RBP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 SAMM50Q9Y512 469 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 TRAV20A0A0B4J274 112 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 VAMP4O75379 141 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 KCNH1O95259 989 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 BMP4P12644 408 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 RXRBP28702 533 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 ADCYAP1R1P41586 468 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 NCAPHQ15003 741 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 PCBP2Q15366 365 aaKnown RBP eCLIP2.17□□□□□ -2.062e-7■■■□□ 17.1
BRCA1-202ENST00000354071 PTPN21Q16825 1174 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 FSTL4Q6MZW2 842 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 PPP4R4Q6NUP7 873 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 HDXQ7Z353 690 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 TMEM87BQ96K49 555 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 PCDHA8Q9Y5H6 950 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 AATKQ6ZMQ8 1374 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 GLRX3O76003 335 aaKnown RBP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 SOD2P04179 222 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 BCRP11274 1271 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 KCNA6P17658 529 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 TTLL4Q14679 1199 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 TMEM201Q5SNT2 666 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 ZBTB37Q5TC79 503 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 DDX46Q7L014 1031 aaKnown RBP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 SMC5Q8IY18 1101 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 JPH3Q8WXH2 748 aaPredicted RBP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 C1orf159Q96HA4 380 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 SLC26A8Q96RN1 970 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 NOL6Q9H6R4 1146 aaKnown RBP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 ZFYVE1Q9HBF4 777 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 GPRC5CQ9NQ84 441 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 TMEFF2Q9UIK5 374 aaPredicted RBP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 MAPRE3Q9UPY8 281 aa2.17□□□□□ -2.06
BRCA1-202ENST00000354071 LUC7L2Q9Y383 392 aaKnown RBP2.17□□□□□ -2.06
BRCA1-202ENST00000354071 DNAJC25-GNG10A0A024R161 153 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 TCRBV16S1A1N1A0A5B0 115 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 MSCO60682 206 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 AOC2O75106 756 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 ZSCAN20P17040 1043 aaPredicted RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 PMS1P54277 932 aaKnown RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 C19orf57Q0VDD7 668 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 SLBPQ14493 270 aaKnown RBP eCLIP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 MLC1Q15049 377 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 DPY19L1Q2PZI1 675 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 INTS3Q68E01 1043 aaKnown RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 HEATR6Q6AI08 1181 aaKnown RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 MCATQ8IVS2 390 aaKnown RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 TAB3Q8N5C8 712 aaPredicted RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 VPS37AQ8NEZ2 397 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 PI4K2BQ8TCG2 481 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 APBA2Q99767 749 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 MKRN2Q9H000 416 aaKnown RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 DISC1Q9NRI5 854 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 FNIP2Q9P278 1114 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 TAGLN3Q9UI15 199 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 PNMA2Q9UL42 364 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 DAAM1Q9Y4D1 1078 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 ELOA3CA0A087WX78 387 aaPredicted RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 ELOA3DA6NLF2 546 aaPredicted RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 H2AFYO75367 372 aaKnown RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 SERPINB3P29508 390 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 ELOA3BQ3SY89 546 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 COL23A1Q86Y22 540 aaPredicted RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 SLFN12Q8IYM2 578 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 GSTCDQ8NEC7 633 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 ELOA3Q8NG57 546 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 PPP1R13LQ8WUF5 828 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 GPR101Q96P66 508 aaPredicted RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 EMILIN2Q9BXX0 1053 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 WNT10AQ9GZT5 417 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 SPTLC3Q9NUV7 552 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 ANKRD34BA5PLL1 514 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 ALG1L2C9J202 215 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 H7C1W4 665 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 FZD9O00144 591 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 KCNK3O14649 394 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 TMPRSS2O15393 492 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 RFPL3O75679 317 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 APBA3O96018 575 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 MYL3P08590 195 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 LCP1P13796 627 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 AP3B2Q13367 1082 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 LRRFIP1Q32MZ4 808 aaKnown RBP2.16□□□□□ -2.06
BRCA1-202ENST00000354071 CCDC103Q8IW40 242 aa2.16□□□□□ -2.06
BRCA1-202ENST00000354071 CCDC144CPQ8IYA2 1237 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms