RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 INF2Q27J81 1249 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 NCAPH2Q6IBW4 605 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 RASSF8Q8NHQ8 419 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 SRP68Q9UHB9 627 aaKnown RBP20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 GUCA1BQ9UMX6 200 aa20.4■□□□□ 0.86
PTP4A3-202ENST00000349124 ITIH6Q6UXX5 1313 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 ENC1O14682 589 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 GOLGA8HP0CJ92 632 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 FECHP22830 423 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 NOA1Q8NC60 698 aaKnown RBP20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 PODXL2Q9NZ53 605 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 PLCH1Q4KWH8 1693 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 NKRFO15226 690 aaKnown RBP eCLIP20.39■□□□□ 0.851e-6■■■□□ 15.8
PTP4A3-202ENST00000349124 ATP8B1O43520 1251 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 GRIK5Q16478 980 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 PNMA1Q8ND90 353 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 KAT14Q9H8E8 782 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 ABCB6Q9NP58 842 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 HDAC6Q9UBN7 1215 aa20.39■□□□□ 0.85
PTP4A3-202ENST00000349124 CYTH3O43739 400 aa20.38■□□□□ 0.85
PTP4A3-202ENST00000349124 BEND6Q5SZJ8 279 aaPredicted RBP20.38■□□□□ 0.85
PTP4A3-202ENST00000349124 CYP26C1Q6V0L0 522 aa20.38■□□□□ 0.85
PTP4A3-202ENST00000349124 TTF2Q9UNY4 1162 aaKnown RBP20.38■□□□□ 0.85
PTP4A3-202ENST00000349124 N4BP1O75113 896 aaKnown RBP20.38■□□□□ 0.85
PTP4A3-202ENST00000349124 TRAPPC10P48553 1259 aa20.38■□□□□ 0.85
PTP4A3-202ENST00000349124 DISC1Q9NRI5 854 aa20.38■□□□□ 0.85
PTP4A3-202ENST00000349124 ATP8A2Q9NTI2 1148 aa20.38■□□□□ 0.85
PTP4A3-202ENST00000349124 SPATA31A1Q5TZJ5 1347 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 CCDC151A5D8V7 595 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 PCP11498 1178 aaKnown RBP20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 KLK7P49862 253 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 ADSSL1Q8N142 457 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 CCDC51Q96ER9 411 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 RNF216Q9NWF9 866 aaPredicted RBP20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 EPN1Q9Y6I3 576 aaPredicted RBP20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 VSNL1P62760 191 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 HEATR3Q7Z4Q2 680 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 CEP112Q8N8E3 955 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 NAPGQ99747 312 aaPredicted RBP20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 PDE11AQ9HCR9 933 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 PCDHA6Q9UN73 950 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 PCDHA4Q9UN74 947 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 PCDHA8Q9Y5H6 950 aa20.37■□□□□ 0.85
PTP4A3-202ENST00000349124 MYH13Q9UKX3 1938 aa20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 LONP1P36776 959 aaKnown RBP20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 DIXDC1Q155Q3 683 aa20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 DTHD1Q6ZMT9 781 aa20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 MAP2K7O14733 419 aa20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 KLRC4O43908 158 aa20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 SRGAP2O75044 1071 aa20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 CLEC4GQ6UXB4 293 aa20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 MB21D1Q8N884 522 aa20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 SH3RF3Q8TEJ3 882 aaPredicted RBP20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 GPR101Q96P66 508 aaPredicted RBP20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 MAD2L2Q9UI95 211 aa20.36■□□□□ 0.85
PTP4A3-202ENST00000349124 CCDC194A0A1B0GVG4 234 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 NDUFA10O95299 355 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 JAKMIP3Q5VZ66 844 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 ARL6IP4Q66PJ3 421 aaKnown RBP20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 WDR59Q6PJI9 974 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 AGPAT5Q9NUQ2 364 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 DOT1LQ8TEK3 1739 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 CCDC66A2RUB6 948 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 M0R2N6 131 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 KIF5BP33176 963 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 BRD3Q15059 726 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 HPS3Q969F9 1004 aa20.35■□□□□ 0.85
PTP4A3-202ENST00000349124 NUTM2BA6NNL0 878 aaPredicted RBP20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 NUTM2EB1AL46 878 aaPredicted RBP20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 B4DLN1 442 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 H7C1D1 291 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 UBA7P41226 1012 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 SPAG1Q07617 926 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 DZIP1Q86YF9 867 aaKnown RBP20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 GPIHBP1Q8IV16 184 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 ANKRD20A12PQ8NF67 263 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 ARPP21Q9UBL0 812 aaPredicted RBP20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 SAP30BPQ9UHR5 308 aaKnown RBP20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 STX8Q9UNK0 236 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 CALML3P27482 149 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 USP5P45974 858 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 SBK1Q52WX2 424 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 C12orf60Q5U649 245 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 MKNK2Q9HBH9 465 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 RMND1Q9NWS8 449 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 ADAM21Q9UKJ8 722 aa20.34■□□□□ 0.85
PTP4A3-202ENST00000349124 OR8K1Q8NGG5 319 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 ZNF507Q8TCN5 953 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 TRIM47Q96LD4 638 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 RAB21Q9UL25 225 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 MYO6Q9UM54 1294 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 L1RE1Q9UN81 338 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 CTAGE15A4D2H0 777 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 RASSF10A6NK89 507 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 CTAGE8P0CG41 777 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 AMPD2Q01433 879 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 CTAGE6Q86UF2 777 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 CTAGE4Q8IX94 777 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 MSANTD4Q8NCY6 345 aa20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 NLRP3Q96P20 1036 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms