RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 PLCD1P51178 756 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 ADCY7P51828 1080 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 CTSWP56202 376 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 TFAP4Q01664 338 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 LONRF2Q1L5Z9 754 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 RILPL1Q5EBL4 403 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 ST13P4Q8IZP2 240 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 ARHGEF10O15013 1369 aa12.2□□□□□ -0.46
SMARCE1-202ENST00000348513 B4GALNT2Q8NHY0 566 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 RABGGTAQ92696 567 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 DDX23Q9BUQ8 820 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 SGSM2O43147 1006 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 KRT75O95678 551 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 HOXB7P09629 217 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 SCNN1DP51172 638 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 RNASE9P60153 205 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 LCA5Q86VQ0 697 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 STAMQ92783 540 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 USP40Q9NVE5 1235 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 ITGB1BP2Q9UKP3 347 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 BCS1LQ9Y276 419 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 ATP5DP30049 168 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 MYL5Q02045 173 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 BABAM1Q9NWV8 329 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 ANKRD65E5RJM6 399 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 SERPINI2O75830 405 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 WDR44Q5JSH3 913 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 CEP70Q8NHQ1 597 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 TRIM11Q96F44 468 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 NAP1L4Q99733 375 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 VPS54Q9P1Q0 977 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 MKL2Q9ULH7 1088 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 IVNS1ABPQ9Y6Y0 642 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 ARHGEF35A5YM69 484 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 TMED10P49755 219 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 SUGP1Q8IWZ8 645 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 MIS12Q9H081 205 aa12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 TTF2Q9UNY4 1162 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-202ENST00000348513 DLGAP5Q15398 846 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 TACC3Q9Y6A5 838 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 SMTNP53814 917 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 PSMD6Q15008 389 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 MSL3Q8N5Y2 521 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 GPHNQ9NQX3 736 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 STXBP3O00186 592 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 AP1G2O75843 785 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 SASH1O94885 1247 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 PHKG2P15735 406 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 TBC1D8BQ0IIM8 1120 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 TCIRG1Q13488 830 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 MFSD14BQ5SR56 506 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 FYB2Q5VWT5 728 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 FBXO41Q8TF61 875 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 CNGB3Q9NQW8 809 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 RHBDL2Q9NX52 303 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 FRMPD2Q68DX3 1309 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 VCAM1P19320 739 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 BCAMP50895 628 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 CCDC122Q5T0U0 273 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 FAM182BQ5T319 152 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 CDC37L1Q7L3B6 337 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 NELFCDQ8IXH7 590 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 IFT20Q8IY31 132 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 ATP2A3Q93084 1043 aa12.18□□□□□ -0.46
SMARCE1-202ENST00000348513 TLDC2A0PJX2 215 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 ZBED4O75132 1171 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 LONRF3Q496Y0 759 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 IL17REQ8NFR9 667 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 UNC45AQ9H3U1 944 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 PLCB1Q9NQ66 1216 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 TCP10L2B9ZVM9 353 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 AKR1B15C9JRZ8 316 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 E7EWF7 191 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 S100BP04271 92 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 HNRNPH1P31943 449 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 RPS8P62241 208 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 STRN3Q13033 797 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 CXorf38Q8TB03 319 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 SDR42E1Q8WUS8 393 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 LEO1Q8WVC0 666 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 MAK16Q9BXY0 300 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 PAX7P23759 505 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 HAUS3Q68CZ6 603 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 LZICQ8WZA0 190 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■■■ 27.2
SMARCE1-202ENST00000348513 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 CORO7P57737 925 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 NONOQ15233 471 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 TMCO5AQ8N6Q1 288 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 IGSF22Q8N9C0 903 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 MSANTD4Q8NCY6 345 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 LRWD1Q9UFC0 647 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 DISP1Q96F81 1524 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms