RNA–Protein interactions for RNA: ENST00000348332.7

NCOA1-202, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NCOA1, Length 6,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-202ENST00000348332 ARPP21Q9UBL0 812 aaPredicted RBP4.68□□□□□ -1.66
NCOA1-202ENST00000348332 HERC5Q9UII4 1024 aaKnown RBP4.68□□□□□ -1.66
NCOA1-202ENST00000348332 TOGARAM1Q9Y4F4 1720 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 RFX7Q2KHR2 1363 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 SALL1Q9NSC2 1324 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 USO1O60763 962 aaKnown RBP4.68□□□□□ -1.66
NCOA1-202ENST00000348332 MUM1L1Q5H9M0 696 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 IFIT1BQ5T764 474 aaKnown RBP4.68□□□□□ -1.66
NCOA1-202ENST00000348332 GIMAP6Q6P9H5 292 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 TNMDQ9H2S6 317 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 TSHZ2Q9NRE2 1034 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 ATP8A2Q9NTI2 1148 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 USP40Q9NVE5 1235 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 MCM9Q9NXL9 1143 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 SEPT10Q9P0V9 454 aa4.68□□□□□ -1.66
NCOA1-202ENST00000348332 COL5A3P25940 1745 aaPredicted RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 SHANK3Q9BYB0 1731 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 FDX1P10109 184 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 ERCC3P19447 782 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 ATICP31939 592 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 HLTFQ14527 1009 aaKnown RBP eCLIP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 CFAP100Q494V2 611 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 IFT74Q96LB3 600 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 MTRQ99707 1265 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 GPCPD1Q9NPB8 672 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 OLA1Q9NTK5 396 aaKnown RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 USP25Q9UHP3 1055 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 SLC8A2Q9UPR5 921 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 SIPA1L3O60292 1781 aaPredicted RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 UBR3Q6ZT12 1888 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 KIF28PB7ZC32 967 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 GOLIM4O00461 696 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 STX10O60499 249 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 PPFIA3O75145 1194 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 IL1R1P14778 569 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 GNAQP50148 359 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 SKOR2Q2VWA4 1001 aaPredicted RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 ARHGAP29Q52LW3 1261 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 TMCO4Q5TGY1 634 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 CCDC102BQ68D86 513 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 FILIP1Q7Z7B0 1213 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 FAM83AQ86UY5 434 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 ELMOD1Q8N336 334 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 L3MBTL3Q96JM7 780 aaPredicted RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 MFSD1Q9H3U5 465 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 RRAGCQ9HB90 399 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 GPRC5DQ9NZD1 345 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 MANSC4A6NHS7 340 aaPredicted RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 TCP10L2B9ZVM9 353 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 RNF113AO15541 343 aaKnown RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 VIL1P09327 827 aaKnown RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 POLA2Q14181 598 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 SLC9A5Q14940 896 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 UBE3CQ15386 1083 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 MICU3Q86XE3 530 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 HELBQ8NG08 1087 aaPredicted RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 TDRD7Q8NHU6 1098 aaKnown RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 EXOC6BQ9Y2D4 811 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 SLC4A4Q9Y6R1 1079 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 TAF1LQ8IZX4 1826 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 SLC4A1P02730 911 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 ZNF18P17022 549 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 CALML3P27482 149 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 ATXN3P54252 364 aaPredicted RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 SEMA3FQ13275 785 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 FBXO33Q7Z6M2 555 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 CDAN1Q8IWY9 1227 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 ANKRD35Q8N283 1001 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 GBP3Q9H0R5 595 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 MYOZ2Q9NPC6 264 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 PPANQ9NQ55 473 aaKnown RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 AGTPBP1Q9UPW5 1226 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 RIPOR2Q9Y4F9 1068 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 CCP110O43303 1012 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 SSTR3P32745 418 aaPredicted RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 CRKP46108 304 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 KIAA0825Q8IV33 1275 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 NLGN2Q8NFZ4 835 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 APPBP2Q92624 585 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 PDRG1Q9NUG6 133 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 ANAPC4Q9UJX5 808 aa4.67□□□□□ -1.66
NCOA1-202ENST00000348332 BZW2Q9Y6E2 419 aaKnown RBP4.67□□□□□ -1.66
NCOA1-202ENST00000348332 GADD45BO75293 160 aaPredicted RBP4.66□□□□□ -1.66
NCOA1-202ENST00000348332 NPM3O75607 178 aaKnown RBP4.66□□□□□ -1.66
NCOA1-202ENST00000348332 PRPF6O94906 941 aaKnown RBP4.66□□□□□ -1.66
NCOA1-202ENST00000348332 NOGQ13253 232 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 USH1GQ495M9 461 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 HMG20BQ9P0W2 317 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 MKRN1Q9UHC7 482 aaKnown RBP4.66□□□□□ -1.66
NCOA1-202ENST00000348332 NUB1Q9Y5A7 615 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 SLC4A7Q9Y6M7 1214 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 TMEM88BA6NKF7 163 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 CBFA2T2O43439 604 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 IGFBP4P22692 258 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 PTPN12Q05209 780 aaKnown RBP4.66□□□□□ -1.66
NCOA1-202ENST00000348332 ANKRD13AQ8IZ07 590 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 MTMR14Q8NCE2 650 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 CCDC148Q8NFR7 591 aa4.66□□□□□ -1.66
NCOA1-202ENST00000348332 NUP88Q99567 741 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms