RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 BLIDQ8IZY5 108 aa17.06■□□□□ 0.32
CTTN-202ENST00000346329 RRP36Q96EU6 259 aaKnown RBP17.06■□□□□ 0.32
CTTN-202ENST00000346329 CFBP00751 764 aa17.06■□□□□ 0.32
CTTN-202ENST00000346329 FOXP4Q8IVH2 680 aaPredicted RBP17.06■□□□□ 0.32
CTTN-202ENST00000346329 KRI1Q8N9T8 703 aaKnown RBP17.06■□□□□ 0.32
CTTN-202ENST00000346329 NEDD1Q8NHV4 660 aa17.06■□□□□ 0.32
CTTN-202ENST00000346329 DDX39AO00148 427 aaKnown RBP17.05■□□□□ 0.32
CTTN-202ENST00000346329 CHMP2AO43633 222 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 NBPF12Q5TAG4 269 aaPredicted RBP17.05■□□□□ 0.32
CTTN-202ENST00000346329 CIAPIN1Q6FI81 312 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 WASF1Q92558 559 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 RNF26Q9BY78 433 aaPredicted RBP17.05■□□□□ 0.32
CTTN-202ENST00000346329 PCDHA5Q9Y5H7 936 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 F5H6K3 240 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 KLRC3Q07444 240 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 PTPAQ15257 358 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 BRAPQ7Z569 592 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 FMR1NBQ8N0W7 255 aaPredicted RBP17.05■□□□□ 0.32
CTTN-202ENST00000346329 KCNG4Q8TDN1 519 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 TBCKQ8TEA7 893 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 MAP3K14Q99558 947 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
CTTN-202ENST00000346329 GAKO14976 1311 aa17.05■□□□□ 0.32
CTTN-202ENST00000346329 POTEMA6NI47 508 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 PPP1R11O60927 126 aaPredicted RBP17.04■□□□□ 0.32
CTTN-202ENST00000346329 ADALQ6DHV7 355 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 TBC1D7Q9P0N9 293 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 PRPF3O43395 683 aaKnown RBP17.04■□□□□ 0.32
CTTN-202ENST00000346329 TTLL1O95922 423 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
CTTN-202ENST00000346329 PTGS1P23219 599 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 NPY5RQ15761 445 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 EAPPQ56P03 285 aaPredicted RBP17.04■□□□□ 0.32
CTTN-202ENST00000346329 CC2D2BQ6DHV5 1058 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 PI4KBQ9UBF8 816 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 ZNRF3Q9ULT6 936 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 ZNF541Q9H0D2 1346 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 CYP2W1Q8TAV3 490 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 PHF20Q9BVI0 1012 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 ANKRD31Q8N7Z5 1873 aa17.04■□□□□ 0.32
CTTN-202ENST00000346329 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
CTTN-202ENST00000346329 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 TMEM87AQ8NBN3 555 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 STAT3P40763 770 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 GRM1Q13255 1194 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 IL17AQ16552 155 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 ANGEL2Q5VTE6 544 aaKnown RBP17.03■□□□□ 0.32
CTTN-202ENST00000346329 DYMQ7RTS9 669 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 CPLX3Q8WVH0 158 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 UPF1Q92900 1129 aaKnown RBP eCLIP17.03■□□□□ 0.32
CTTN-202ENST00000346329 ZDHHC15Q96MV8 337 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 DDX19AQ9NUU7 478 aaKnown RBP17.03■□□□□ 0.32
CTTN-202ENST00000346329 ZBTB21Q9ULJ3 1066 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
CTTN-202ENST00000346329 NDUFB10O96000 172 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 DGKHQ86XP1 1220 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 NAP1L5Q96NT1 182 aaPredicted RBP17.02■□□□□ 0.32
CTTN-202ENST00000346329 ZNF341Q9BYN7 854 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 SMCHD1A6NHR9 2005 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 DDAH1O94760 285 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 CALM1P0DP23 149 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 CALM2P0DP24 149 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 CALM3P0DP25 149 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.32
CTTN-202ENST00000346329 JMJD4Q9H9V9 463 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 MYOZ2Q9NPC6 264 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 HDAC9Q9UKV0 1011 aa17.02■□□□□ 0.32
CTTN-202ENST00000346329 PLS1Q14651 629 aa17.02■□□□□ 0.31
CTTN-202ENST00000346329 MTFR1LQ9H019 292 aa17.02■□□□□ 0.31
CTTN-202ENST00000346329 POLR3EQ9NVU0 708 aa17.02■□□□□ 0.31
CTTN-202ENST00000346329 PCDHA6Q9UN73 950 aa17.02■□□□□ 0.31
CTTN-202ENST00000346329 PCDHA8Q9Y5H6 950 aa17.02■□□□□ 0.31
CTTN-202ENST00000346329 CASZ1Q86V15 1759 aa17.02■□□□□ 0.31
CTTN-202ENST00000346329 SNED1Q8TER0 1413 aa17.02■□□□□ 0.31
CTTN-202ENST00000346329 COL4A5P29400 1685 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 MEIS1O00470 390 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 U2AF2P26368 475 aaKnown RBP eCLIP17.01■□□□□ 0.319e-12■□□□□ 10.9
CTTN-202ENST00000346329 GRM4Q14833 912 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 METTL16Q86W50 562 aaKnown RBP17.01■□□□□ 0.31
CTTN-202ENST00000346329 TANGO6Q9C0B7 1094 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 RBM28Q9NW13 759 aaKnown RBP17.01■□□□□ 0.31
CTTN-202ENST00000346329 ESPNB1AK53 854 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 MSNP26038 577 aaKnown RBP17.01■□□□□ 0.31
CTTN-202ENST00000346329 CYP4A11Q02928 519 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 QRICH1Q2TAL8 776 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 MAEAQ7L5Y9 396 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 ENGASEQ8NFI3 743 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 STXBP3O00186 592 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 CCDC186Q7Z3E2 898 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 SIAH1Q8IUQ4 282 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 RNF181Q9P0P0 153 aa17.01■□□□□ 0.31
CTTN-202ENST00000346329 TRMT1Q9NXH9 659 aaKnown RBP17■□□□□ 0.31
CTTN-202ENST00000346329 HACL1Q9UJ83 578 aa17■□□□□ 0.31
CTTN-202ENST00000346329 FBXO2Q9UK22 296 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms