RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 SNW1Q13573 536 aaKnown RBP14.63□□□□□ -0.07
CLK3-201ENST00000345005 NPY5RQ15761 445 aa14.63□□□□□ -0.07
CLK3-201ENST00000345005 CAMK4Q16566 473 aa14.63□□□□□ -0.07
CLK3-201ENST00000345005 TMEM179Q6ZVK1 233 aa14.63□□□□□ -0.07
CLK3-201ENST00000345005 PLA2G4DQ86XP0 818 aa14.63□□□□□ -0.07
CLK3-201ENST00000345005 LRRC47Q8N1G4 583 aaKnown RBP14.63□□□□□ -0.07
CLK3-201ENST00000345005 TNFRSF25Q93038 417 aa14.63□□□□□ -0.07
CLK3-201ENST00000345005 MKL1Q969V6 931 aa14.63□□□□□ -0.07
CLK3-201ENST00000345005 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
CLK3-201ENST00000345005 CGNQ9P2M7 1197 aaKnown RBP14.63□□□□□ -0.07
CLK3-201ENST00000345005 CLRN2A0PK11 232 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 KIF2AO00139 706 aaPredicted RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 CUTAO60888 179 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 BMP15O95972 392 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 RPS12P25398 132 aaKnown RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 ZNF75DP51815 510 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 SLC35G1Q2M3R5 365 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 SARM1Q6SZW1 724 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 BLIDQ8IZY5 108 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 FMR1NBQ8N0W7 255 aaPredicted RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 CCDC12Q8WUD4 166 aaPredicted RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 ZBED3Q96IU2 234 aaPredicted RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 TRIM5Q9C035 493 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 RIOX1Q9H6W3 641 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 BARHL2Q9NY43 387 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 OGFRQ9NZT2 677 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 SEC63Q9UGP8 760 aaKnown RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 PYCARDQ9ULZ3 195 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 MORC2Q9Y6X9 1032 aaPredicted RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 DICER1Q9UPY3 1922 aaKnown RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 FAM196BA6NMK8 535 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 VEGFAP15692 232 aaPredicted RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 ZSCAN20P17040 1043 aaPredicted RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 ATP2B2Q01814 1243 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 ABCB5Q2M3G0 1257 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 GPATCH4Q5T3I0 446 aaKnown RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 RBM26Q5T8P6 1007 aaKnown RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 FAM83AQ86UY5 434 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 KRI1Q8N9T8 703 aaKnown RBP14.62□□□□□ -0.07
CLK3-201ENST00000345005 GPKOWQ92917 476 aaPredicted RBP eCLIP14.62□□□□□ -0.07
CLK3-201ENST00000345005 CBX8Q9HC52 389 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 PCDHA4Q9UN74 947 aa14.62□□□□□ -0.07
CLK3-201ENST00000345005 A0A1B0GVL5 298 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 GOLGA6L19H0YKK7 550 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 TUBB4AP04350 444 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 TRAPPC10P48553 1259 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 ZNF543Q08ER8 600 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 ANO6Q4KMQ2 910 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 WWC2Q6AWC2 1192 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 HEATR3Q7Z4Q2 680 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 CLEC10AQ8IUN9 316 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 SPC24Q8NBT2 197 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 DAGLBQ8NCG7 672 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 SYT17Q9BSW7 474 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.61□□□□□ -0.07
CLK3-201ENST00000345005 PCDHB6Q9Y5E3 794 aa14.61□□□□□ -0.07
CLK3-201ENST00000345005 CNTNAP1P78357 1384 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 hCG_1984214I3L0E3 225 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 STXBP3O00186 592 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 AP5Z1O43299 807 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 SLURP2P0DP57 97 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 EEF2P13639 858 aaKnown RBP14.6□□□□□ -0.07
CLK3-201ENST00000345005 ZNF165P49910 485 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 NDUFA8P51970 172 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 RASGRP2Q7LDG7 609 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 CCDC186Q7Z3E2 898 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 ZNF713Q8N859 430 aaPredicted RBP14.6□□□□□ -0.07
CLK3-201ENST00000345005 MRFAP1L1Q96HT8 127 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 VEZTQ9HBM0 779 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 MYOZ2Q9NPC6 264 aa14.6□□□□□ -0.07
CLK3-201ENST00000345005 FRMPD2Q68DX3 1309 aaPredicted RBP14.59□□□□□ -0.07
CLK3-201ENST00000345005 ATP2B1P20020 1258 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 PTGS1P23219 599 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 PTPREP23469 700 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 ZNF280AP59817 542 aaPredicted RBP14.59□□□□□ -0.07
CLK3-201ENST00000345005 FAM193AP78312 1265 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 PDE4CQ08493 712 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 SEPT2Q15019 361 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 RESP18Q5W5W9 173 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 CKAP2LQ8IYA6 745 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 DCAF4Q8WV16 495 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 UBA5Q9GZZ9 404 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 CPVLQ9H3G5 476 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 VAT1LQ9HCJ6 419 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 FAM237AA0A1B0GTK4 181 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 WNT10BO00744 389 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 TBC1D12O60347 775 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 GNA11P29992 359 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 TNNI2P48788 182 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 ICA1Q05084 483 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 EARS2Q5JPH6 523 aaKnown RBP14.59□□□□□ -0.07
CLK3-201ENST00000345005 C17orf53Q8N3J3 647 aaPredicted RBP14.59□□□□□ -0.07
CLK3-201ENST00000345005 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
CLK3-201ENST00000345005 CCDC112Q8NEF3 446 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 DPF2Q92785 391 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 PIGSQ96S52 555 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 ZMYND12Q9H0C1 365 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 C6orf50Q9HD87 102 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 GPCPD1Q9NPB8 672 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms