RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 TACC3Q9Y6A5 838 aa20.05■□□□□ 0.8
CD55-202ENST00000343420 RANBP6O60518 1105 aaKnown RBP20.04■□□□□ 0.8
CD55-202ENST00000343420 ZBED4O75132 1171 aa20.04■□□□□ 0.8
CD55-202ENST00000343420 CNGA1P29973 690 aa20.04■□□□□ 0.8
CD55-202ENST00000343420 KCTD2Q14681 263 aa20.04■□□□□ 0.8
CD55-202ENST00000343420 TRPV1Q8NER1 839 aa20.04■□□□□ 0.8
CD55-202ENST00000343420 KIFC2Q96AC6 838 aa20.04■□□□□ 0.8
CD55-202ENST00000343420 MAML3Q96JK9 1138 aa20.04■□□□□ 0.8
CD55-202ENST00000343420 IL17RBQ9NRM6 502 aa20.04■□□□□ 0.8
CD55-202ENST00000343420 DDX20Q9UHI6 824 aaKnown RBP20.04■□□□□ 0.8
CD55-202ENST00000343420 STX8Q9UNK0 236 aa20.04■□□□□ 0.8
CD55-202ENST00000343420 CTDP1Q9Y5B0 961 aaPredicted RBP20.04■□□□□ 0.8
CD55-202ENST00000343420 ATP2A1O14983 1001 aa20.03■□□□□ 0.8
CD55-202ENST00000343420 CYBAP13498 195 aa20.03■□□□□ 0.8
CD55-202ENST00000343420 SNRNP48Q6IEG0 339 aaKnown RBP20.03■□□□□ 0.8
CD55-202ENST00000343420 SLC38A10Q9HBR0 1119 aa20.03■□□□□ 0.8
CD55-202ENST00000343420 COLQQ9Y215 455 aaPredicted RBP20.03■□□□□ 0.8
CD55-202ENST00000343420 SMCHD1A6NHR9 2005 aa20.03■□□□□ 0.8
CD55-202ENST00000343420 HIP1O00291 1037 aa20.02■□□□□ 0.8
CD55-202ENST00000343420 GMCL1Q96IK5 515 aa20.02■□□□□ 0.8
CD55-202ENST00000343420 DIS3Q9Y2L1 958 aaKnown RBP20.02■□□□□ 0.8
CD55-202ENST00000343420 TMEM232C9JQI7 657 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 NMT2O60551 498 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 PGK2P07205 417 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 FDX1P10109 184 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 COL6A1P12109 1028 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 SLC1A4P43007 532 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 NOVP48745 357 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 CPXCR1Q8N123 301 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 CHURC1Q8WUH1 139 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 TOMM22Q9NS69 142 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 DIAPH3Q9NSV4 1193 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 PFASO15067 1338 aa20.01■□□□□ 0.79
CD55-202ENST00000343420 MCCP23508 829 aa20■□□□□ 0.79
CD55-202ENST00000343420 STAT2P52630 851 aa20■□□□□ 0.79
CD55-202ENST00000343420 OAZ1P54368 228 aa20■□□□□ 0.79
CD55-202ENST00000343420 HAND2P61296 217 aa20■□□□□ 0.79
CD55-202ENST00000343420 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
CD55-202ENST00000343420 ZNF792Q3KQV3 632 aa20■□□□□ 0.79
CD55-202ENST00000343420 RRP12Q5JTH9 1297 aaKnown RBP20■□□□□ 0.79
CD55-202ENST00000343420 CWC27Q6UX04 472 aaKnown RBP20■□□□□ 0.79
CD55-202ENST00000343420 CHRDL2Q6WN34 429 aa20■□□□□ 0.79
CD55-202ENST00000343420 FAM160B2Q86V87 743 aa20■□□□□ 0.79
CD55-202ENST00000343420 STAG1Q8WVM7 1258 aa20■□□□□ 0.79
CD55-202ENST00000343420 RAVER2Q9HCJ3 691 aaKnown RBP20■□□□□ 0.79
CD55-202ENST00000343420 ISY1Q9ULR0 285 aaKnown RBP20■□□□□ 0.79
CD55-202ENST00000343420 RIPK3Q9Y572 518 aa20■□□□□ 0.79
CD55-202ENST00000343420 LAMA4Q16363 1823 aa19.99■□□□□ 0.79
CD55-202ENST00000343420 SEPT4O43236 478 aa19.99■□□□□ 0.79
CD55-202ENST00000343420 PLA2G6O60733 806 aa19.99■□□□□ 0.79
CD55-202ENST00000343420 PCP11498 1178 aaKnown RBP19.99■□□□□ 0.79
CD55-202ENST00000343420 AKNAD1Q5T1N1 836 aa19.99■□□□□ 0.79
CD55-202ENST00000343420 TINF2Q9BSI4 451 aa19.99■□□□□ 0.79
CD55-202ENST00000343420 TCP11L1Q9NUJ3 509 aa19.99■□□□□ 0.79
CD55-202ENST00000343420 NRBP1Q9UHY1 535 aa19.99■□□□□ 0.79
CD55-202ENST00000343420 PDE4AP27815 886 aa19.98■□□□□ 0.79
CD55-202ENST00000343420 SLC4A3P48751 1232 aa19.98■□□□□ 0.79
CD55-202ENST00000343420 IKQ13123 557 aaPredicted RBP19.98■□□□□ 0.79
CD55-202ENST00000343420 PRAMEF19Q5SWL8 479 aa19.98■□□□□ 0.79
CD55-202ENST00000343420 RCSD1Q6JBY9 416 aa19.98■□□□□ 0.79
CD55-202ENST00000343420 MFSD6Q6ZSS7 791 aa19.98■□□□□ 0.79
CD55-202ENST00000343420 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.98■□□□□ 0.79
CD55-202ENST00000343420 CHST13Q8NET6 341 aa19.98■□□□□ 0.79
CD55-202ENST00000343420 DDX11Q96FC9 970 aa19.98■□□□□ 0.79
CD55-202ENST00000343420 RNF41Q9H4P4 317 aaPredicted RBP19.98■□□□□ 0.79
CD55-202ENST00000343420 FBXO40Q9UH90 709 aa19.98■□□□□ 0.79
CD55-202ENST00000343420 KCTD1Q719H9 257 aa19.97■□□□□ 0.79
CD55-202ENST00000343420 C7orf61Q8IZ16 206 aa19.97■□□□□ 0.79
CD55-202ENST00000343420 MSL3Q8N5Y2 521 aaKnown RBP19.97■□□□□ 0.79
CD55-202ENST00000343420 CHMP4CQ96CF2 233 aa19.97■□□□□ 0.79
CD55-202ENST00000343420 MCM3APO60318 1980 aa19.96■□□□□ 0.79
CD55-202ENST00000343420 DNAJC25-GNG10A0A024R161 153 aa19.96■□□□□ 0.79
CD55-202ENST00000343420 DNM1LO00429 736 aa19.96■□□□□ 0.79
CD55-202ENST00000343420 ZNF213O14771 459 aa19.96■□□□□ 0.79
CD55-202ENST00000343420 TOP1P11387 765 aaKnown RBP19.96■□□□□ 0.79
CD55-202ENST00000343420 TBC1D10CQ8IV04 446 aa19.96■□□□□ 0.79
CD55-202ENST00000343420 ARRDC4Q8NCT1 418 aa19.96■□□□□ 0.79
CD55-202ENST00000343420 DCAF4Q8WV16 495 aa19.96■□□□□ 0.79
CD55-202ENST00000343420 RANBP2P49792 3224 aaKnown RBP19.96■□□□□ 0.79
CD55-202ENST00000343420 NT5C2P49902 561 aa19.95■□□□□ 0.78
CD55-202ENST00000343420 TTC22Q5TAA0 569 aa19.95■□□□□ 0.78
CD55-202ENST00000343420 ANKRD35Q8N283 1001 aa19.95■□□□□ 0.78
CD55-202ENST00000343420 TMEM47Q9BQJ4 181 aa19.95■□□□□ 0.78
CD55-202ENST00000343420 DSCC1Q9BVC3 393 aa19.95■□□□□ 0.78
CD55-202ENST00000343420 PRO3102Q9H379 93 aa19.95■□□□□ 0.78
CD55-202ENST00000343420 RBM27Q9P2N5 1060 aaKnown RBP19.95■□□□□ 0.78
CD55-202ENST00000343420 MTMR7Q9Y216 660 aa19.95■□□□□ 0.78
CD55-202ENST00000343420 CCDC96Q2M329 555 aa19.94■□□□□ 0.78
CD55-202ENST00000343420 TKFCQ3LXA3 575 aa19.94■□□□□ 0.78
CD55-202ENST00000343420 ANO1Q5XXA6 986 aa19.94■□□□□ 0.78
CD55-202ENST00000343420 RASGRP2Q7LDG7 609 aa19.94■□□□□ 0.78
CD55-202ENST00000343420 ESR2Q92731 530 aa19.94■□□□□ 0.78
CD55-202ENST00000343420 TTC14Q96N46 770 aa19.94■□□□□ 0.78
CD55-202ENST00000343420 SENP6Q9GZR1 1112 aaPredicted RBP19.94■□□□□ 0.78
CD55-202ENST00000343420 PRR12Q9ULL5 1215 aa19.94■□□□□ 0.78
CD55-202ENST00000343420 ZNF536O15090 1300 aa19.94■□□□□ 0.78
CD55-202ENST00000343420 SYNGAP1Q96PV0 1343 aa19.94■□□□□ 0.78
CD55-202ENST00000343420 ZNF865P0CJ78 1059 aaPredicted RBP19.93■□□□□ 0.78
CD55-202ENST00000343420 GSPT1P15170 499 aaKnown RBP19.93■□□□□ 0.78
CD55-202ENST00000343420 LRRC26Q2I0M4 334 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms