RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CREG2Q8IUH2 290 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 VGLL2Q8N8G2 317 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 GDAP1L1Q96MZ0 367 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 LACRTQ9GZZ8 138 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 INCENPQ9NQS7 918 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 WNT7AO00755 349 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 PCCAP05165 728 aaPredicted RBP10.83□□□□□ -0.68
HOXA1-201ENST00000343060 CABP4P57796 275 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 CTDSPL2Q05D32 466 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 C2orf54Q08AI8 447 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 PKN1Q16512 942 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 TTMPQ5BVD1 217 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 SND1Q7KZF4 910 aaKnown RBP eCLIP10.83□□□□□ -0.68
HOXA1-201ENST00000343060 KIAA1328Q86T90 577 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 ZNF654Q8IZM8 581 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 FANCBQ8NB91 859 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 CAGE1Q8TC20 777 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 AIDAQ96BJ3 306 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 TSGA10Q9BZW7 698 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 SNX12Q9UMY4 172 aa10.83□□□□□ -0.68
HOXA1-201ENST00000343060 SRGNP10124 158 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 MAP2K2P36507 400 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 FUT2Q10981 343 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 ANKRD18AQ8IVF6 992 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 RETREG2Q8NC44 543 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 CABS1Q96KC9 395 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 NAPBQ9H115 298 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 ZBTB3Q9H5J0 574 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 THAP9Q9H5L6 903 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 VPS54Q9P1Q0 977 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 TNS2Q63HR2 1409 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 SRRM3A6NNA2 597 aaPredicted RBP10.82□□□□□ -0.68
HOXA1-201ENST00000343060 ZNF185O15231 689 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 COBLO75128 1261 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 IDH1O75874 414 aaKnown RBP10.82□□□□□ -0.68
HOXA1-201ENST00000343060 XBP1P17861 261 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 ATP6V1AP38606 617 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 VAV2P52735 878 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 SEMA3FQ13275 785 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 TNS3Q68CZ2 1445 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 MFSD6Q6ZSS7 791 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 ADSSL1Q8N142 457 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 RRP36Q96EU6 259 aaKnown RBP10.82□□□□□ -0.68
HOXA1-201ENST00000343060 NLRP2Q9NX02 1062 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 GGA2Q9UJY4 613 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 TFR2Q9UP52 801 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 DLEC1Q9Y238 1755 aa10.82□□□□□ -0.68
HOXA1-201ENST00000343060 RTL9Q8NET4 1388 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 SPATA31A3Q5VYP0 1347 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 GSG1L2A8MUP6 293 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 MEFVO15553 781 aaPredicted RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 RPN1P04843 607 aaKnown RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 IDEP14735 1019 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 PRCPP42785 496 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 MNAT1P51948 309 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 APBA1Q02410 837 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 IFIT5Q13325 482 aaKnown RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 TCIRG1Q13488 830 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 NPY5RQ15761 445 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 TSR1Q2NL82 804 aaKnown RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 METTL24Q5JXM2 366 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 KDM7AQ6ZMT4 941 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 TSEN2Q8NCE0 465 aaKnown RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 C1orf131Q8NDD1 294 aaKnown RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 TTLL11Q8NHH1 800 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 NUP58Q9BVL2 599 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 BLZF1Q9H2G9 400 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 DONSONQ9NYP3 566 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 RREB1Q92766 1687 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 PNPLA7Q6ZV29 1317 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 MYH3P11055 1940 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 RASSF10A6NK89 507 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 C21orf2O43822 256 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 KIF1CO43896 1103 aaKnown RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 UQCRFS1P1P0C7P4 283 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 CCDC172P0C7W6 258 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 GPTP24298 496 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 DNM2P50570 870 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 PLCB4Q15147 1175 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 SEC23AQ15436 765 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 FIGNQ5HY92 759 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 AEBP2Q6ZN18 517 aaPredicted RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 GPATCH11Q8N954 259 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 TRIM58Q8NG06 486 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 NOC3LQ8WTT2 800 aaKnown RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 ARL8AQ96BM9 186 aa10.81□□□□□ -0.68
HOXA1-201ENST00000343060 DMGDHQ9UI17 866 aaKnown RBP10.81□□□□□ -0.68
HOXA1-201ENST00000343060 A0A1W2PQJ5 194 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 PRPF3O43395 683 aaKnown RBP10.8□□□□□ -0.68
HOXA1-201ENST00000343060 MBD4O95243 580 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 TRAPPC10P48553 1259 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 ZBED6P86452 979 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 KCNB1Q14721 858 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 EZH2Q15910 746 aaKnown RBP10.8□□□□□ -0.68
HOXA1-201ENST00000343060 HAUS3Q68CZ6 603 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 SPATA4Q8NEY3 305 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 SECISBP2LQ93073 1101 aaKnown RBP10.8□□□□□ -0.68
HOXA1-201ENST00000343060 LRRC1Q9BTT6 524 aa10.8□□□□□ -0.68
HOXA1-201ENST00000343060 NHEJ1Q9H9Q4 299 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms