RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 GPAT2Q6NUI2 795 aa10.13□□□□□ -0.79
NLRC4-201ENST00000342905 SYNE3Q6ZMZ3 975 aa10.13□□□□□ -0.79
NLRC4-201ENST00000342905 GADL1Q6ZQY3 521 aa10.13□□□□□ -0.79
NLRC4-201ENST00000342905 TMEM179Q6ZVK1 233 aa10.13□□□□□ -0.79
NLRC4-201ENST00000342905 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
NLRC4-201ENST00000342905 CCDC144CPQ8IYA2 1237 aa10.13□□□□□ -0.79
NLRC4-201ENST00000342905 NSUN7Q8NE18 718 aaKnown RBP10.13□□□□□ -0.79
NLRC4-201ENST00000342905 SMARCC2Q8TAQ2 1214 aa10.13□□□□□ -0.79
NLRC4-201ENST00000342905 ANKS1AQ92625 1134 aa10.13□□□□□ -0.79
NLRC4-201ENST00000342905 CCDC17Q96LX7 622 aa10.13□□□□□ -0.79
NLRC4-201ENST00000342905 LLPHQ9BRT6 129 aaKnown RBP10.13□□□□□ -0.79
NLRC4-201ENST00000342905 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.13□□□□□ -0.79
NLRC4-201ENST00000342905 PNMA3Q9UL41 463 aa10.13□□□□□ -0.79
NLRC4-201ENST00000342905 CASP8AP2Q9UKL3 1982 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 MYH7BA7E2Y1 1941 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 LOC285556D6RIA3 1793 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 PTPDC1A2A3K4 754 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 USP17L10C9JJH3 530 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 CDC27P30260 824 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 RCAN1P53805 252 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 HMGCS2P54868 508 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 SP3Q02447 781 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 PKP1Q13835 747 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 RAB3GAP1Q15042 981 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 SHROOM1Q2M3G4 852 aaPredicted RBP10.12□□□□□ -0.79
NLRC4-201ENST00000342905 DGKHQ86XP1 1220 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 CEP95Q96GE4 821 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 ERO1AQ96HE7 468 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 FEZ1Q99689 392 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 TMEM121BQ9BXQ6 578 aaPredicted RBP10.12□□□□□ -0.79
NLRC4-201ENST00000342905 FAM217BQ9NTX9 383 aaPredicted RBP10.12□□□□□ -0.79
NLRC4-201ENST00000342905 TMOD4Q9NZQ9 345 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 RLFQ13129 1914 aa10.12□□□□□ -0.79
NLRC4-201ENST00000342905 ADGRA2Q96PE1 1338 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 MPHOSPH10O00566 681 aaKnown RBP10.11□□□□□ -0.79
NLRC4-201ENST00000342905 DDAH1O94760 285 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 ADD1P35611 737 aaKnown RBP10.11□□□□□ -0.79
NLRC4-201ENST00000342905 NOVP48745 357 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 USP14P54578 494 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 TROAPQ12815 778 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 ARHGEF6Q15052 776 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 PKN2Q16513 984 aaKnown RBP10.11□□□□□ -0.79
NLRC4-201ENST00000342905 RTN1Q16799 776 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 CATIPQ7Z7H3 387 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 CLEC10AQ8IUN9 316 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 NUP133Q8WUM0 1156 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 CHMP4CQ96CF2 233 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 DDX11Q96FC9 970 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 TMEM47Q9BQJ4 181 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 KIAA1683Q9H0B3 1180 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 KAT14Q9H8E8 782 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 STX8Q9UNK0 236 aa10.11□□□□□ -0.79
NLRC4-201ENST00000342905 CPLX1O14810 134 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 PPFIA3O75145 1194 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 CALM1P0DP23 149 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 CALM2P0DP24 149 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 CALM3P0DP25 149 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 SYT1P21579 422 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 GUCY1A2P33402 732 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 NUCB2P80303 420 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 HMGN5P82970 282 aaKnown RBP10.1□□□□□ -0.79
NLRC4-201ENST00000342905 DGKZQ13574 1117 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 SEPT2Q15019 361 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 NTRK3Q16288 839 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 TREML2Q5T2D2 321 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 USP17L2Q6R6M4 530 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 C17orf99Q6UX52 265 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 FANCBQ8NB91 859 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 PNMA1Q8ND90 353 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 SMCR8Q8TEV9 937 aaPredicted RBP10.1□□□□□ -0.79
NLRC4-201ENST00000342905 C12orf42Q96LP6 360 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 SH2D4AQ9H788 454 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 MTMR4Q9NYA4 1195 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 ZDHHC9Q9Y397 364 aa10.1□□□□□ -0.79
NLRC4-201ENST00000342905 HTTP42858 3142 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 DHX16O60231 1041 aaKnown RBP10.09□□□□□ -0.79
NLRC4-201ENST00000342905 BRD1O95696 1058 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 CYP2C8P10632 490 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 TOP1P11387 765 aaKnown RBP10.09□□□□□ -0.79
NLRC4-201ENST00000342905 FDPSP14324 419 aaKnown RBP10.09□□□□□ -0.79
NLRC4-201ENST00000342905 OSBPP22059 807 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 HOXA7P31268 230 aaPredicted RBP10.09□□□□□ -0.79
NLRC4-201ENST00000342905 ICA1Q05084 483 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 KIF22Q14807 665 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 GRM4Q14833 912 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 PHKBQ93100 1093 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 MCOLN1Q9GZU1 580 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 KANSL2Q9H9L4 492 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 ARHGEF10LQ9HCE6 1279 aa10.09□□□□□ -0.79
NLRC4-201ENST00000342905 STK36Q9NRP7 1315 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 STX6O43752 255 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 CDKL5O76039 1030 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 PLEKHA8P1O95397 391 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 TTLL1O95922 423 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 GNRH1P01148 92 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 BCRP11274 1271 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 IFNAR1P17181 557 aa10.08□□□□□ -0.8
NLRC4-201ENST00000342905 GCLCP48506 637 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms