RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 PRPF38AQ8NAV1 312 aaKnown RBP25.64■■□□□ 1.7
RBM38-201ENST00000342690 GPRC5AQ8NFJ5 357 aa25.64■■□□□ 1.7
RBM38-201ENST00000342690 KIFC2Q96AC6 838 aa25.64■■□□□ 1.7
RBM38-201ENST00000342690 ARHGAP39Q9C0H5 1083 aa25.64■■□□□ 1.7
RBM38-201ENST00000342690 MGAMO43451 1857 aa25.64■■□□□ 1.69
RBM38-201ENST00000342690 VWA5AO00534 786 aa25.63■■□□□ 1.69
RBM38-201ENST00000342690 ECM2O94769 699 aaPredicted RBP25.63■■□□□ 1.69
RBM38-201ENST00000342690 CTGFP29279 349 aa25.63■■□□□ 1.69
RBM38-201ENST00000342690 IKQ13123 557 aaPredicted RBP25.63■■□□□ 1.69
RBM38-201ENST00000342690 Q3C1V9 767 aa25.63■■□□□ 1.69
RBM38-201ENST00000342690 SYNE3Q6ZMZ3 975 aa25.63■■□□□ 1.69
RBM38-201ENST00000342690 SGMS1Q86VZ5 419 aa25.63■■□□□ 1.69
RBM38-201ENST00000342690 FBXL16Q8N461 479 aa25.63■■□□□ 1.69
RBM38-201ENST00000342690 CHURC1Q8WUH1 139 aa25.63■■□□□ 1.69
RBM38-201ENST00000342690 GOLGA8HP0CJ92 632 aa25.62■■□□□ 1.69
RBM38-201ENST00000342690 BTNL9Q6UXG8 535 aa25.62■■□□□ 1.69
RBM38-201ENST00000342690 ZNF654Q8IZM8 581 aa25.62■■□□□ 1.69
RBM38-201ENST00000342690 MB21D1Q8N884 522 aa25.62■■□□□ 1.69
RBM38-201ENST00000342690 REPS2Q8NFH8 660 aa25.62■■□□□ 1.69
RBM38-201ENST00000342690 BRF1Q92994 677 aa25.62■■□□□ 1.69
RBM38-201ENST00000342690 AGXT2Q9BYV1 514 aa25.62■■□□□ 1.69
RBM38-201ENST00000342690 SLC12A7Q9Y666 1083 aa25.62■■□□□ 1.69
RBM38-201ENST00000342690 SLC16A2P36021 539 aa25.61■■□□□ 1.69
RBM38-201ENST00000342690 ANKRD1Q15327 319 aa25.61■■□□□ 1.69
RBM38-201ENST00000342690 ASPRV1Q53RT3 343 aa25.61■■□□□ 1.69
RBM38-201ENST00000342690 GPATCH4Q5T3I0 446 aaKnown RBP25.61■■□□□ 1.69
RBM38-201ENST00000342690 IL27Q8NEV9 243 aa25.61■■□□□ 1.69
RBM38-201ENST00000342690 ALDH8A1Q9H2A2 487 aaPredicted RBP25.61■■□□□ 1.69
RBM38-201ENST00000342690 DDAH1O94760 285 aa25.6■■□□□ 1.69
RBM38-201ENST00000342690 PARP1P09874 1014 aaKnown RBP25.6■■□□□ 1.69
RBM38-201ENST00000342690 PSMC4P43686 418 aa25.6■■□□□ 1.69
RBM38-201ENST00000342690 TROAPQ12815 778 aa25.6■■□□□ 1.69
RBM38-201ENST00000342690 KIF22Q14807 665 aa25.6■■□□□ 1.69
RBM38-201ENST00000342690 GRM4Q14833 912 aa25.6■■□□□ 1.69
RBM38-201ENST00000342690 TMEM132BQ14DG7 1078 aa25.6■■□□□ 1.69
RBM38-201ENST00000342690 MYL10Q9BUA6 226 aa25.6■■□□□ 1.69
RBM38-201ENST00000342690 PRR12Q9ULL5 1215 aa25.6■■□□□ 1.69
RBM38-201ENST00000342690 NAP1L2Q9ULW6 460 aaPredicted RBP25.6■■□□□ 1.69
RBM38-201ENST00000342690 KLF18A0A0U1RQI7 1052 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 CALM1P0DP23 149 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 CALM2P0DP24 149 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 CALM3P0DP25 149 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 APOBRQ0VD83 1088 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 TOB2Q14106 344 aaPredicted RBP25.59■■□□□ 1.69
RBM38-201ENST00000342690 SYDE2Q5VT97 1194 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 TRIM47Q96LD4 638 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 SPATC1LQ9H0A9 340 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 PORCNQ9H237 461 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 CPVLQ9H3G5 476 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 SLC38A10Q9HBR0 1119 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 MAD2L2Q9UI95 211 aa25.59■■□□□ 1.69
RBM38-201ENST00000342690 ZNF214Q9UL59 606 aaPredicted RBP25.59■■□□□ 1.69
RBM38-201ENST00000342690 ZBED4O75132 1171 aa25.58■■□□□ 1.69
RBM38-201ENST00000342690 PLS1Q14651 629 aa25.58■■□□□ 1.69
RBM38-201ENST00000342690 APOA5Q6Q788 366 aa25.58■■□□□ 1.69
RBM38-201ENST00000342690 STAG2Q8N3U4 1231 aa25.58■■□□□ 1.69
RBM38-201ENST00000342690 NUP133Q8WUM0 1156 aa25.58■■□□□ 1.69
RBM38-201ENST00000342690 MOV10L1Q9BXT6 1211 aaKnown RBP25.58■■□□□ 1.69
RBM38-201ENST00000342690 UBA5Q9GZZ9 404 aa25.58■■□□□ 1.69
RBM38-201ENST00000342690 PALM3A6NDB9 673 aaPredicted RBP25.57■■□□□ 1.68
RBM38-201ENST00000342690 ST18O60284 1047 aa25.57■■□□□ 1.68
RBM38-201ENST00000342690 AK2P54819 239 aa25.57■■□□□ 1.68
RBM38-201ENST00000342690 FCGRTP55899 365 aa25.57■■□□□ 1.68
RBM38-201ENST00000342690 SNAP25P60880 206 aa25.57■■□□□ 1.68
RBM38-201ENST00000342690 CCNA1P78396 465 aa25.57■■□□□ 1.68
RBM38-201ENST00000342690 RAB11FIP4Q86YS3 637 aa25.57■■□□□ 1.68
RBM38-201ENST00000342690 EFCC1Q9HA90 598 aa25.57■■□□□ 1.68
RBM38-201ENST00000342690 BRPF3Q9ULD4 1205 aa25.57■■□□□ 1.68
RBM38-201ENST00000342690 CTDP1Q9Y5B0 961 aaPredicted RBP25.57■■□□□ 1.68
RBM38-201ENST00000342690 GOLGA8BA8MQT2 603 aa25.56■■□□□ 1.68
RBM38-201ENST00000342690 ZBTB43O43298 467 aa25.56■■□□□ 1.68
RBM38-201ENST00000342690 FMNL1O95466 1100 aaPredicted RBP25.56■■□□□ 1.68
RBM38-201ENST00000342690 FDX1P10109 184 aa25.56■■□□□ 1.68
RBM38-201ENST00000342690 OTOP1Q7RTM1 612 aa25.56■■□□□ 1.68
RBM38-201ENST00000342690 CTU1Q7Z7A3 348 aaKnown RBP25.56■■□□□ 1.68
RBM38-201ENST00000342690 MICU3Q86XE3 530 aa25.56■■□□□ 1.68
RBM38-201ENST00000342690 CTCFLQ8NI51 663 aaPredicted RBP25.56■■□□□ 1.68
RBM38-201ENST00000342690 MAP3K14Q99558 947 aa25.56■■□□□ 1.68
RBM38-201ENST00000342690 RAVER2Q9HCJ3 691 aaKnown RBP25.56■■□□□ 1.68
RBM38-201ENST00000342690 TRIM17Q9Y577 477 aa25.56■■□□□ 1.68
RBM38-201ENST00000342690 RXRAP19793 462 aa25.55■■□□□ 1.68
RBM38-201ENST00000342690 KIF5BP33176 963 aa25.55■■□□□ 1.68
RBM38-201ENST00000342690 RCAN1P53805 252 aa25.55■■□□□ 1.68
RBM38-201ENST00000342690 CPXCR1Q8N123 301 aa25.55■■□□□ 1.68
RBM38-201ENST00000342690 RANBP17Q9H2T7 1088 aaKnown RBP25.55■■□□□ 1.68
RBM38-201ENST00000342690 KLRF2D3W0D1 207 aa25.54■■□□□ 1.68
RBM38-201ENST00000342690 TNPO2O14787 897 aaKnown RBP25.54■■□□□ 1.68
RBM38-201ENST00000342690 ATP2A1O14983 1001 aa25.54■■□□□ 1.68
RBM38-201ENST00000342690 MAPK4P31152 587 aa25.54■■□□□ 1.68
RBM38-201ENST00000342690 STAT3P40763 770 aa25.54■■□□□ 1.68
RBM38-201ENST00000342690 OAZ1P54368 228 aa25.54■■□□□ 1.68
RBM38-201ENST00000342690 ARHGEF6Q15052 776 aa25.54■■□□□ 1.68
RBM38-201ENST00000342690 RIOX2Q8IUF8 465 aa25.54■■□□□ 1.68
RBM38-201ENST00000342690 ZNF536O15090 1300 aa25.54■■□□□ 1.68
RBM38-201ENST00000342690 GOLGA8AA7E2F4 631 aa25.53■■□□□ 1.68
RBM38-201ENST00000342690 ERCC3P19447 782 aa25.53■■□□□ 1.68
RBM38-201ENST00000342690 EVCP57679 992 aa25.53■■□□□ 1.68
RBM38-201ENST00000342690 SLC35G1Q2M3R5 365 aa25.53■■□□□ 1.68
RBM38-201ENST00000342690 SNRNP48Q6IEG0 339 aaKnown RBP25.53■■□□□ 1.68
RBM38-201ENST00000342690 CCDC174Q6PII3 467 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms