RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 SMIM22K7EJ46 135 aa20.41■□□□□ 0.86
TRA2B-202ENST00000342294 ACRP10323 421 aa20.41■□□□□ 0.86
TRA2B-202ENST00000342294 EEF2P13639 858 aaKnown RBP20.41■□□□□ 0.86
TRA2B-202ENST00000342294 PSRC1Q6PGN9 363 aaPredicted RBP20.41■□□□□ 0.86
TRA2B-202ENST00000342294 AACSQ86V21 672 aa20.41■□□□□ 0.86
TRA2B-202ENST00000342294 TMEM199Q8N511 208 aa20.41■□□□□ 0.86
TRA2B-202ENST00000342294 GLT1D1Q96MS3 346 aa20.41■□□□□ 0.86
TRA2B-202ENST00000342294 BDP1A6H8Y1 2624 aa20.4■□□□□ 0.86
TRA2B-202ENST00000342294 CDK8P49336 464 aa20.4■□□□□ 0.86
TRA2B-202ENST00000342294 RAB30Q15771 203 aa20.4■□□□□ 0.86
TRA2B-202ENST00000342294 CCDC85BQ15834 202 aaPredicted RBP20.4■□□□□ 0.86
TRA2B-202ENST00000342294 FAM126BQ8IXS8 530 aa20.4■□□□□ 0.86
TRA2B-202ENST00000342294 HERVK_113Q902F9 699 aa20.4■□□□□ 0.86
TRA2B-202ENST00000342294 UPF3AQ9H1J1 476 aaKnown RBP20.4■□□□□ 0.86
TRA2B-202ENST00000342294 MYO9BQ13459 2157 aa20.39■□□□□ 0.86
TRA2B-202ENST00000342294 PLXNA1Q9UIW2 1896 aa20.39■□□□□ 0.86
TRA2B-202ENST00000342294 COL11A1P12107 1806 aaPredicted RBP20.39■□□□□ 0.86
TRA2B-202ENST00000342294 ARVCFO00192 962 aa20.39■□□□□ 0.85
TRA2B-202ENST00000342294 ADCY6O43306 1168 aa20.39■□□□□ 0.85
TRA2B-202ENST00000342294 ASGR1P07306 291 aa20.39■□□□□ 0.85
TRA2B-202ENST00000342294 C12orf60Q5U649 245 aa20.39■□□□□ 0.85
TRA2B-202ENST00000342294 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
TRA2B-202ENST00000342294 ZNF467Q7Z7K2 595 aaPredicted RBP20.39■□□□□ 0.85
TRA2B-202ENST00000342294 PCSK9Q8NBP7 692 aaKnown RBP20.39■□□□□ 0.85
TRA2B-202ENST00000342294 FAM122AQ96E09 287 aa20.39■□□□□ 0.85
TRA2B-202ENST00000342294 KANSL2Q9H9L4 492 aa20.39■□□□□ 0.85
TRA2B-202ENST00000342294 MSRAQ9UJ68 235 aa20.39■□□□□ 0.85
TRA2B-202ENST00000342294 ZHX1Q9UKY1 873 aaPredicted RBP20.39■□□□□ 0.85
TRA2B-202ENST00000342294 A0A0U1RQG5 324 aaPredicted RBP20.38■□□□□ 0.85
TRA2B-202ENST00000342294 PRKAB2O43741 272 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 CD4P01730 458 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 IGFBP4P22692 258 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 GJA9P57773 515 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 FAM83BQ5T0W9 1011 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 PPP1R12CQ9BZL4 782 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 ARMT1Q9H993 441 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 IL23AQ9NPF7 189 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 ATP8A2Q9NTI2 1148 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 CXXC1Q9P0U4 656 aaPredicted RBP20.38■□□□□ 0.85
TRA2B-202ENST00000342294 YBX2Q9Y2T7 364 aaKnown RBP20.38■□□□□ 0.85
TRA2B-202ENST00000342294 RIPK3Q9Y572 518 aa20.38■□□□□ 0.85
TRA2B-202ENST00000342294 CYP2D7A0A087X1C5 515 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 CTAGE5O15320 804 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 C6orf222P0C671 652 aaPredicted RBP20.37■□□□□ 0.85
TRA2B-202ENST00000342294 BMP1P13497 986 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 NKX3-2P78367 333 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 ACVR2BQ13705 512 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 C16orf86Q6ZW13 317 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 ERC1Q8IUD2 1116 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 TEX13BQ9BXU2 312 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 NKX2-4Q9H2Z4 354 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 GOPCQ9HD26 462 aa20.37■□□□□ 0.85
TRA2B-202ENST00000342294 CYP2C18P33260 490 aa20.36■□□□□ 0.85
TRA2B-202ENST00000342294 CEP85Q6P2H3 762 aa20.36■□□□□ 0.85
TRA2B-202ENST00000342294 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRA2B-202ENST00000342294 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRA2B-202ENST00000342294 DDX11Q96FC9 970 aa20.36■□□□□ 0.85
TRA2B-202ENST00000342294 FGD4Q96M96 766 aa20.36■□□□□ 0.85
TRA2B-202ENST00000342294 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.36■□□□□ 0.85
TRA2B-202ENST00000342294 EXOC6BQ9Y2D4 811 aa20.36■□□□□ 0.85
TRA2B-202ENST00000342294 USP17L12C9JPN9 530 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 USP17L21D6R901 530 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 GOLIM4O00461 696 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 ATP2A1O14983 1001 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 TLR3O15455 904 aaKnown RBP20.35■□□□□ 0.85
TRA2B-202ENST00000342294 HOXD11P31277 338 aaPredicted RBP20.35■□□□□ 0.85
TRA2B-202ENST00000342294 CCDC144BQ3MJ40 725 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 SNRNP48Q6IEG0 339 aaKnown RBP20.35■□□□□ 0.85
TRA2B-202ENST00000342294 SLC43A3Q8NBI5 491 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 IL27Q8NEV9 243 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 VTI1AQ96AJ9 217 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 NECAB3Q96P71 396 aaPredicted RBP20.35■□□□□ 0.85
TRA2B-202ENST00000342294 SLF1Q9BQI6 1058 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.35■□□□□ 0.85
TRA2B-202ENST00000342294 ABHD16BQ9H3Z7 469 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 SLC28A3Q9HAS3 691 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 SPC25Q9HBM1 224 aa20.35■□□□□ 0.85
TRA2B-202ENST00000342294 MBD4O95243 580 aa20.34■□□□□ 0.85
TRA2B-202ENST00000342294 FGBP02675 491 aa20.34■□□□□ 0.85
TRA2B-202ENST00000342294 SLFNL1Q499Z3 407 aa20.34■□□□□ 0.85
TRA2B-202ENST00000342294 GNASQ5JWF2 1037 aa20.34■□□□□ 0.85
TRA2B-202ENST00000342294 IL1RAPL2Q9NP60 686 aa20.34■□□□□ 0.85
TRA2B-202ENST00000342294 CHD7Q9P2D1 2997 aa20.33■□□□□ 0.85
TRA2B-202ENST00000342294 ADD2P35612 726 aa20.33■□□□□ 0.85
TRA2B-202ENST00000342294 RHPN1Q8TCX5 695 aa20.33■□□□□ 0.85
TRA2B-202ENST00000342294 NUP88Q99567 741 aaPredicted RBP20.33■□□□□ 0.85
TRA2B-202ENST00000342294 C1QTNF1Q9BXJ1 281 aa20.33■□□□□ 0.85
TRA2B-202ENST00000342294 KATNBL1Q9H079 304 aa20.33■□□□□ 0.85
TRA2B-202ENST00000342294 MTIF3Q9H2K0 278 aaKnown RBP20.33■□□□□ 0.85
TRA2B-202ENST00000342294 UMODL1Q5DID0 1318 aa20.32■□□□□ 0.84
TRA2B-202ENST00000342294 RLBP1P12271 317 aa20.32■□□□□ 0.84
TRA2B-202ENST00000342294 PRPF38AQ8NAV1 312 aaKnown RBP20.32■□□□□ 0.84
TRA2B-202ENST00000342294 DNAJC2Q99543 621 aaKnown RBP20.32■□□□□ 0.84
TRA2B-202ENST00000342294 TSPYL2Q9H2G4 693 aaPredicted RBP20.32■□□□□ 0.84
TRA2B-202ENST00000342294 ZBED9Q6R2W3 1325 aa20.31■□□□□ 0.84
TRA2B-202ENST00000342294 APBB1O00213 710 aa20.31■□□□□ 0.84
TRA2B-202ENST00000342294 RAD21O60216 631 aa20.31■□□□□ 0.84
TRA2B-202ENST00000342294 CTR9Q6PD62 1173 aa20.31■□□□□ 0.84
TRA2B-202ENST00000342294 ARMCX2Q7L311 632 aa20.31■□□□□ 0.84
TRA2B-202ENST00000342294 OTOP2Q7RTS6 562 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms