RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PPP1R3GB7ZBB8 358 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 AHCYL1O43865 530 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 GSTA1P08263 222 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 CCT6AP40227 531 aaKnown RBP20.61■□□□□ 0.89
SMPD1-201ENST00000342245 PAFAH1B1P43034 410 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 STX17P56962 302 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 ELF3P78545 371 aaPredicted RBP20.61■□□□□ 0.89
SMPD1-201ENST00000342245 KCNB1Q14721 858 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 MIS18BP1Q6P0N0 1132 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 LRIG3Q6UXM1 1119 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 RALYLQ86SE5 291 aaKnown RBP20.61■□□□□ 0.89
SMPD1-201ENST00000342245 TACC1O75410 805 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 SMNDC1O75940 238 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMPD1-201ENST00000342245 NOSTRINQ8IVI9 506 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 KIRREL3Q8IZU9 778 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 WHAMMQ8TF30 809 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 WASF1Q92558 559 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 ZNHIT6Q9NWK9 470 aaKnown RBP20.61■□□□□ 0.89
SMPD1-201ENST00000342245 CAPN11Q9UMQ6 739 aa20.61■□□□□ 0.89
SMPD1-201ENST00000342245 MYO5AQ9Y4I1 1855 aaKnown RBP20.6■□□□□ 0.89
SMPD1-201ENST00000342245 TRAPPC3O43617 180 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 AP1G2O75843 785 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 FESP07332 822 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 CD44P16070 742 aaKnown RBP20.6■□□□□ 0.89
SMPD1-201ENST00000342245 RAB27AP51159 221 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 KIF5AQ12840 1032 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 SAFBQ15424 915 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMPD1-201ENST00000342245 MEA1Q16626 185 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 HAUS3Q68CZ6 603 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 C8orf74Q6P047 294 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 SEC16BQ96JE7 1060 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 MOV10L1Q9BXT6 1211 aaKnown RBP20.6■□□□□ 0.89
SMPD1-201ENST00000342245 RWDD2AQ9UIY3 292 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 RNF225M0QZC1 329 aaPredicted RBP20.6■□□□□ 0.89
SMPD1-201ENST00000342245 RNF113AO15541 343 aaKnown RBP20.6■□□□□ 0.89
SMPD1-201ENST00000342245 TFCP2Q12800 502 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 CCDC181Q5TID7 509 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 HDAC7Q8WUI4 952 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 PAIP2Q9BPZ3 127 aaKnown RBP20.6■□□□□ 0.89
SMPD1-201ENST00000342245 GPHNQ9NQX3 736 aaPredicted RBP20.6■□□□□ 0.89
SMPD1-201ENST00000342245 RNF14Q9UBS8 474 aa20.6■□□□□ 0.89
SMPD1-201ENST00000342245 MAST3O60307 1309 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 STK36Q9NRP7 1315 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 LUC7L3O95232 432 aaKnown RBP20.59■□□□□ 0.89
SMPD1-201ENST00000342245 METAP2P50579 478 aaKnown RBP eCLIP20.59■□□□□ 0.89
SMPD1-201ENST00000342245 TCP11X2Q5H9J9 407 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 GKAP1Q5VSY0 366 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-201ENST00000342245 SH3RF1Q7Z6J0 888 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 APLFQ8IW19 511 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-201ENST00000342245 SPDYE1Q8NFV5 336 aaPredicted RBP20.59■□□□□ 0.89
SMPD1-201ENST00000342245 GDF3Q9NR23 364 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 HYOU1Q9Y4L1 999 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 CFAP73A6NFT4 308 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 CHGBP05060 677 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 PAEPP09466 180 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 PEX19P40855 299 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 HOMEZQ8IX15 550 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 GRAMD1CQ8IYS0 662 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 HVCN1Q96D96 273 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 ZBTB10Q96DT7 871 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 DBNDD2Q9BQY9 259 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 VPS16Q9H269 839 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 PPANQ9NQ55 473 aaKnown RBP20.59■□□□□ 0.89
SMPD1-201ENST00000342245 NOP53Q9NZM5 478 aaKnown RBP20.59■□□□□ 0.89
SMPD1-201ENST00000342245 TBX22Q9Y458 520 aa20.59■□□□□ 0.89
SMPD1-201ENST00000342245 USO1O60763 962 aaKnown RBP20.58■□□□□ 0.89
SMPD1-201ENST00000342245 UBXN1Q04323 297 aa20.58■□□□□ 0.89
SMPD1-201ENST00000342245 DRAXINQ8NBI3 349 aaPredicted RBP20.58■□□□□ 0.89
SMPD1-201ENST00000342245 ACSBG1Q96GR2 724 aa20.58■□□□□ 0.89
SMPD1-201ENST00000342245 NWD1Q149M9 1564 aa20.58■□□□□ 0.88
SMPD1-201ENST00000342245 NLRP6P59044 892 aa20.58■□□□□ 0.88
SMPD1-201ENST00000342245 BIRC3Q13489 604 aa20.58■□□□□ 0.88
SMPD1-201ENST00000342245 EZH2Q15910 746 aaKnown RBP20.58■□□□□ 0.88
SMPD1-201ENST00000342245 ACCSLQ4AC99 568 aa20.58■□□□□ 0.88
SMPD1-201ENST00000342245 CCT6BQ92526 530 aa20.58■□□□□ 0.88
SMPD1-201ENST00000342245 ANKRD27Q96NW4 1050 aa20.58■□□□□ 0.88
SMPD1-201ENST00000342245 PSMD1Q99460 953 aa20.58■□□□□ 0.88
SMPD1-201ENST00000342245 TMBIM4Q9HC24 238 aa20.58■□□□□ 0.88
SMPD1-201ENST00000342245 IRAK4Q9NWZ3 460 aa20.58■□□□□ 0.88
SMPD1-201ENST00000342245 RGPD8O14715 1765 aaPredicted RBP20.57■□□□□ 0.88
SMPD1-201ENST00000342245 TTC26A0AVF1 554 aa20.57■□□□□ 0.88
SMPD1-201ENST00000342245 KCNJ18B7U540 433 aa20.57■□□□□ 0.88
SMPD1-201ENST00000342245 ANXA1P04083 346 aa20.57■□□□□ 0.88
SMPD1-201ENST00000342245 CDC25AP30304 524 aa20.57■□□□□ 0.88
SMPD1-201ENST00000342245 KCNJ12Q14500 433 aa20.57■□□□□ 0.88
SMPD1-201ENST00000342245 NUP58Q9BVL2 599 aa20.57■□□□□ 0.88
SMPD1-201ENST00000342245 SWAP70Q9UH65 585 aa20.57■□□□□ 0.88
SMPD1-201ENST00000342245 BAIAP2L1Q9UHR4 511 aa20.57■□□□□ 0.88
SMPD1-201ENST00000342245 LEMD3Q9Y2U8 911 aa20.57■□□□□ 0.88
SMPD1-201ENST00000342245 PPIP5K2O43314 1243 aa20.56■□□□□ 0.88
SMPD1-201ENST00000342245 IARSP41252 1262 aaKnown RBP20.56■□□□□ 0.88
SMPD1-201ENST00000342245 MYO1EQ12965 1108 aa20.56■□□□□ 0.88
SMPD1-201ENST00000342245 MFN1Q8IWA4 741 aa20.56■□□□□ 0.88
SMPD1-201ENST00000342245 EIF1ADQ8N9N8 165 aaKnown RBP20.56■□□□□ 0.88
SMPD1-201ENST00000342245 RETREG2Q8NC44 543 aa20.56■□□□□ 0.88
SMPD1-201ENST00000342245 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
SMPD1-201ENST00000342245 TBC1D2BQ9UPU7 963 aa20.56■□□□□ 0.88
SMPD1-201ENST00000342245 NDUFB9Q9Y6M9 179 aa20.56■□□□□ 0.88
SMPD1-201ENST00000342245 A0A0G2JLW4 131 aa20.56■□□□□ 0.88
SMPD1-201ENST00000342245 CDK17Q00537 523 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms